Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03727 and BPUM_2224

See DNA alignment / Visit BSNT_03727 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:15
# Commandline: needle
#    -asequence pep-align/BSNT_03727___pstBA.1.24716.seq
#    -bsequence pep-align/BPUM_2224___pstBA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03727___pstBA-BPUM_2224___pstBA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03727___pstBA-BPUM_2224___pstBA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03727___pstBA
# 2: BPUM_2224___pstBA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 292
# Identity:     212/292 (72.6%)
# Similarity:   237/292 (81.2%)
# Gaps:          24/292 ( 8.2%)
# Score: 1069.0
# 
#
#=======================================

BSNT_03727___      1 MAWHDDLQEAYGKLERKEAKNMSEQMVKEKPE-RAVIVPKQ-NHVLEVKD     48
                                           ..||:.||.| .|...|.| ..:|.|:|
BPUM_2224___p      1 ----------------------MVQMLAEKKEIAAKKAPLQAEQILHVQD     28

BSNT_03727___     49 LSIFYGNKQAVHHVNMDIEKNAVTALIGPSGCGKSTFLRNINRMNDLIPS     98
                     |||:||.|:||:|::.:|||||:||||||||||||||||:|||||||||.
BPUM_2224___p     29 LSIYYGEKRAVNHISFEIEKNAITALIGPSGCGKSTFLRSINRMNDLIPG     78

BSNT_03727___     99 ARAEGEILYEGLNILGGNINVVSLRREIGMVFQKPNPFPKSIYANITHAL    148
                     |::||.|:|||||||...||||:||||||||||||||||||||.||||||
BPUM_2224___p     79 AKSEGAIMYEGLNILDDRINVVNLRREIGMVFQKPNPFPKSIYNNITHAL    128

BSNT_03727___    149 KYAGERNKAVLDGIVEESLTKAALWDEVKDRLHSSALSLSGGQQQRLCIA    198
                     |||||:.|:|||..|||||||||||||||||||.||||||||||||||||
BPUM_2224___p    129 KYAGEKRKSVLDDAVEESLTKAALWDEVKDRLHRSALSLSGGQQQRLCIA    178

BSNT_03727___    199 RTLAMKPAVLLLDEPASALDPISNAKIEELITGLKREYSIIIVTHNMQQA    248
                     |||||||:||||||||||||||||||||||:..||.:|||:|||||||||
BPUM_2224___p    179 RTLAMKPSVLLLDEPASALDPISNAKIEELLGELKNDYSIVIVTHNMQQA    228

BSNT_03727___    249 LRVSDRTAFFLNGELVEYGQTEQIFTSPKKQKTEDYINGKFG    290
                     |||||||||||||:||||..||:|||.|.:|||||||||:||
BPUM_2224___p    229 LRVSDRTAFFLNGDLVEYDATERIFTRPAQQKTEDYINGRFG    270


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.