Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03724 and BPUM_2222

See DNA alignment / Visit BSNT_03724 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:15
# Commandline: needle
#    -asequence pep-align/BSNT_03724___yqzC.1.24716.seq
#    -bsequence pep-align/BPUM_2222___yqzC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03724___yqzC-BPUM_2222___yqzC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03724___yqzC-BPUM_2222___yqzC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03724___yqzC
# 2: BPUM_2222___yqzC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 166
# Identity:      97/166 (58.4%)
# Similarity:   124/166 (74.7%)
# Gaps:          12/166 ( 7.2%)
# Score: 464.0
# 
#
#=======================================

BSNT_03724___      1 MTKRGIQAFAGGIILATAVLAAVFYLTDEDQAAAVKDNK-----TVTEQD     45
                     |||:.||.||.|:||||.|||.||:||.:|.|||....|     .||::|
BPUM_2222___y      1 MTKKSIQTFAAGMILATGVLAIVFFLTGKDDAAADTTTKETLAQKVTDKD     50

BSNT_03724___     46 VNNYLDSKKMVSVNRDEYQKLLDSKEKSLTDDSSSDTKTD-------KVK     88
                     |.|||||||.|:|:|:.||:|||.|||:|..:...|:|.|       |.|
BPUM_2222___y     51 VKNYLDSKKEVTVSRETYQQLLDYKEKALKANEDGDSKNDQQKEDKPKGK    100

BSNT_03724___     89 TYKLKIKDGMSTADVSAILEKEGIISSAQDFNDYVIDAGYHKEIRAGEFK    138
                     :.|..||:||||:|||.:|||:|||:|::||||||||||||||||||:|.
BPUM_2222___y    101 SIKFVIKNGMSTSDVSDMLEKDGIINSSKDFNDYVIDAGYHKEIRAGKFN    150

BSNT_03724___    139 VKSDMSFKKIVKTLTR    154
                     :|:.|:||:|||.||:
BPUM_2222___y    151 LKTGMTFKQIVKALTK    166


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