Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03718 and BPUM_2219
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:14
# Commandline: needle
# -asequence pep-align/BSNT_03718___yqgN.1.24716.seq
# -bsequence pep-align/BPUM_2219___yqgN.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03718___yqgN-BPUM_2219___yqgN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03718___yqgN-BPUM_2219___yqgN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03718___yqgN
# 2: BPUM_2219___yqgN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 192
# Identity: 94/192 (49.0%)
# Similarity: 125/192 (65.1%)
# Gaps: 11/192 ( 5.7%)
# Score: 483.0
#
#
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BSNT_03718___ 1 MKSQLRKKTLEALSALSNEDILQKTERMYKYLFSLPEWQNAGTIAVTISR 50
||.:||.:||..|..:|.|:..:.|..::::|..||.|:.|.|||:|:||
BPUM_2219___y 1 MKKELRLQTLAKLDQISAEEFERSTALLHEHLLQLPAWKQAKTIALTMSR 50
BSNT_03718___ 51 GLEIPTRPVIEQAWEEGKQVCIPKCHPDTKKMQFRTYQTDDQLETVYAGL 100
|.||||.|:|::||||||.||||.|.|.||:|.|..|....::.:.|.||
BPUM_2219___y 51 GKEIPTLPLIKKAWEEGKTVCIPTCFPKTKEMTFYEYTPATKMTSSYFGL 100
BSNT_03718___ 101 LEPVIEKTKEVNPSQIDLMIVPGVCFDVNGFRVGFGGGYYDRYLSEYEGK 150
|||...::..|:...|||:||||||||..|:|:|||||||||||::|.|.
BPUM_2219___y 101 LEPDPLESTAVHKEAIDLIIVPGVCFDQRGYRIGFGGGYYDRYLADYHGV 150
BSNT_03718___ 151 TVSLLLECQLYAHVPSLPHDIPVHKLVTE-----DRIISCFS 187
|::|.|..|...||||..|||||..:|:| .|
BPUM_2219___y 151 TIALCLSLQQIKHVPSEAHDIPVSMMVSEKGTFYQR------ 186
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