Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03716 and BPUM_2218

See DNA alignment / Visit BSNT_03716 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:14
# Commandline: needle
#    -asequence pep-align/BSNT_03716___yqgO.1.24716.seq
#    -bsequence pep-align/BPUM_2218___yqgO.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03716___yqgO-BPUM_2218___yqgO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03716___yqgO-BPUM_2218___yqgO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03716___yqgO
# 2: BPUM_2218___yqgO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 58
# Identity:      26/58 (44.8%)
# Similarity:    37/58 (63.8%)
# Gaps:           1/58 ( 1.7%)
# Score: 136.0
# 
#
#=======================================

BSNT_03716___      1 -MKKLLIYAIFAVSAVMFYQNRYRLMNTVLSQPGIRRSFIHLFLRIPFIR     49
                      |.|::...:|.:.|.:..||||||||.:|.|..:|..||...::||:.|
BPUM_2218___y      1 MMNKMIWSIVFTLFAFVLVQNRYRLMNLILGQNQVRHFFIKWLMKIPYFR     50

BSNT_03716___     50 NKFIQQAF     57
                     .|||:|||
BPUM_2218___y     51 TKFIRQAF     58


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