Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03714 and BPUM_2217
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:14
# Commandline: needle
# -asequence pep-align/BSNT_03714___yqgP.1.24716.seq
# -bsequence pep-align/BPUM_2217___yqgP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03714___yqgP-BPUM_2217___yqgP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03714___yqgP-BPUM_2217___yqgP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03714___yqgP
# 2: BPUM_2217___yqgP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 512
# Identity: 250/512 (48.8%)
# Similarity: 345/512 (67.4%)
# Gaps: 5/512 ( 1.0%)
# Score: 1247.0
#
#
#=======================================
BSNT_03714___ 1 MFLLEYTYWKIAAHLVNSGYGVIQAG-ESDEIWLEAPDKSSHDLVRLYKH 49
|.:::..:|::...|...||.::|:. ..|||:.|||..|.:||:|||:.
BPUM_2217___y 1 MNVIDSLFWRVVDELRQKGYEMVQSPYPEDEIFFEAPRNSGYDLIRLYRK 50
BSNT_03714___ 50 DLDFRQEMVRDIEEQAERVERVRHQLGRRRMKLLNVFFSTEAPVDDWEEI 99
|::||||:|||||||..|:.::|..:.:|.:.||.:.|:.:.||||||::
BPUM_2217___y 51 DVNFRQEIVRDIEEQTYRMNQLREAMRKRSLHLLQLQFTADHPVDDWEDL 100
BSNT_03714___ 100 AKKMFEKGTVSVEPAIVRGTMLRDD---LQAVFPSFRPEDCTE-EHASFE 145
..:..:...|:|.|.::....|:.| ||....:....|..| :..:.|
BPUM_2217___y 101 NGQPQKHQKVTVTPVLLNADTLQHDVNELQKWLNTSLTVDVEEAKRDAAE 150
BSNT_03714___ 146 DAQMARERFLSLVLKQEEQRKTEAAVFQNGKPFFAYLFIALQILMFFLLE 195
|....:...|.....||:||:.|.||||||:|.|.||.||:|::||.|||
BPUM_2217___y 151 DVIQLKVNVLQAFDDQEKQRERERAVFQNGRPIFTYLLIAVQVVMFLLLE 200
BSNT_03714___ 196 INGGSTNTETLVAFGAKENSLIAQGEWWRLLTPIVLHIGIAHLAFNTLAL 245
:.||||||.||.|||||.|.||.:||||||:||:.||||:.||.|||.||
BPUM_2217___y 201 LFGGSTNTATLTAFGAKNNGLILEGEWWRLMTPMFLHIGLTHLLFNTFAL 250
BSNT_03714___ 246 WSVGTAVERMYGSGRFLLIYLAAGITGSIASFVFSPYPSAGASGAIFGCL 295
||||.||||:|||.||||||..:||.||||||||:...:|||||||||||
BPUM_2217___y 251 WSVGAAVERIYGSWRFLLIYFISGIFGSIASFVFNTAIAAGASGAIFGCL 300
BSNT_03714___ 296 GALLYVALSNRKMFLRTIGTNIIVIIIINLGFGFAVSNIDNSGHIGGLIG 345
|||||:|:||||:|.||:||||||||:||||.||.||.|||:||:|||:|
BPUM_2217___y 301 GALLYLAISNRKLFFRTMGTNIIVIILINLGIGFTVSGIDNAGHLGGLVG 350
BSNT_03714___ 346 GFFAAAALGLPKAGAFGKRLLSAVLLIALAAGFLYYGLHSPSHQESALIQ 395
||.||.|:.|||.....|..|::::|:.:....||.|.||...:|:|.:.
BPUM_2217___y 351 GFLAALAVRLPKQVQPVKMFLASIVLLLIGGFGLYTGFHSDDQKEAAAVN 400
BSNT_03714___ 396 QASELYQEGKYEEVTELLNEEAAQKDASADLLKILAVSDIKIGEYDQAVS 445
:|:.|:.:..|.|.::.|.|...||||||:.|.|.|:|:.::|..|:|:.
BPUM_2217___y 401 EAASLFDDKNYSEASKRLEEYVHQKDASAEALHIYALSEAQLGHLDKAIG 450
BSNT_03714___ 446 LLERAVKKEPKDHASYYYLALLYAEKNELAQAEKAIRLAVKLKPKEQRYK 495
.|:|::||:|.|....|:|:|||.||.|.|:||..|...:...||..:..
BPUM_2217___y 451 FLQRSLKKDPDDPNKLYHLSLLYVEKGETAKAEDLIEKGLDQDPKNDQLL 500
BSNT_03714___ 496 ELQQQIENNKES 507
:|:|.|||.:..
BPUM_2217___y 501 KLKQYIENTQTH 512
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