Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03711 and BPUM_2216

See DNA alignment / Visit BSNT_03711 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:14
# Commandline: needle
#    -asequence pep-align/BSNT_03711___yqgQ.1.24716.seq
#    -bsequence pep-align/BPUM_2216___yqgQ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03711___yqgQ-BPUM_2216___yqgQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03711___yqgQ-BPUM_2216___yqgQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03711___yqgQ
# 2: BPUM_2216___yqgQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 75
# Identity:      36/75 (48.0%)
# Similarity:    49/75 (65.3%)
# Gaps:           8/75 (10.7%)
# Score: 187.0
# 
#
#=======================================

BSNT_03711___      1 ----MNTFYDVQQLLKTFGHIVYFGDRELEIEFMLDELKELYMNHMIEKE     46
                         |.|.|||||||..||:.|||||||||:|||.|||||:|.:.:|::.
BPUM_2216___y      1 MVETMKTLYDVQQLLMRFGNYVYFGDRELELEFMADELKEMYTSGIIDRT     50

BSNT_03711___     47 QWARAAAVLRKELEQTKNGRDFYKG     71
                     :|:.|..:|:.||.:. |.:..   
BPUM_2216___y     51 EWSNAMTILQMELAKL-NRKTM---     71


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