Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03709 and BPUM_2214
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:14
# Commandline: needle
# -asequence pep-align/BSNT_03709___yqgS.1.24716.seq
# -bsequence pep-align/BPUM_2214___yqgS.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03709___yqgS-BPUM_2214___yqgS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03709___yqgS-BPUM_2214___yqgS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03709___yqgS
# 2: BPUM_2214___yqgS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 639
# Identity: 477/639 (74.6%)
# Similarity: 562/639 (87.9%)
# Gaps: 1/639 ( 0.2%)
# Score: 2560.0
#
#
#=======================================
BSNT_03709___ 1 MRKTFFSKISFMLIAILLMWLKTYAVYKTSFHIKIDNLTQEFILFINPLS 50
|||.....|||:|||.||||:|||.:||:||:|||:|..|||||||||||
BPUM_2214___y 1 MRKKRLKAISFLLIATLLMWVKTYVIYKSSFNIKIENFMQEFILFINPLS 50
BSNT_03709___ 51 FLLLIFGLSLFLKGKNRNRYIIAMSCLVTFVLLANMVFYRFYNDFLTIPV 100
|||.|||:.||:|.||||||||.||.::||:||||:||||||:|||||||
BPUM_2214___y 51 FLLFIFGIGLFMKEKNRNRYIIVMSFILTFILLANIVFYRFYSDFLTIPV 100
BSNT_03709___ 101 LFQTSNMGDLGSSIGTLLEPTDLLLAVDIAVLIWLHIRQKAFQSDIPSTK 150
||||:|||||||||.:|:||.|||:.|||.:|:||:.:|.:|::||..::
BPUM_2214___y 101 LFQTNNMGDLGSSITSLIEPVDLLMFVDIIILMWLYKKQPSFRTDITISR 150
BSNT_03709___ 151 NERAAYFLFVASVYFFNLGLSEAERPQLLTRSFDREMLVKNISLFNFHIY 200
.|||||:||||:.:||||||:|.|||:|||||||||||||||||:|||||
BPUM_2214___y 151 KERAAYYLFVAATFFFNLGLAETERPELLTRSFDREMLVKNISLYNFHIY 200
BSNT_03709___ 201 DGVLQSKQSAQRALADSNSLTEIENYVTANAKDANKRLFGAAKRRNVILV 250
|||||||||||||||||||||||||||:||..|.|::.||.||.||||||
BPUM_2214___y 201 DGVLQSKQSAQRALADSNSLTEIENYVSANQTDRNEKTFGQAKGRNVILV 250
BSNT_03709___ 251 SLESTQSFVINEKLNGEEITPFLNDFIKQSYNFNNVYHQTGQGKTSDSEF 300
|||||||||:||||||:|||||||..||:||||.|.||||||||||||||
BPUM_2214___y 251 SLESTQSFVVNEKLNGKEITPFLNKLIKKSYNFTNFYHQTGQGKTSDSEF 300
BSNT_03709___ 301 IVDNSLYPLGRGAVFFTNAGNQYMAAPEILKNSGYYSAVLHANNKSFWNR 350
||||||||||||||||||..|:|.|.||:||:.||:|:|:||||||||||
BPUM_2214___y 301 IVDNSLYPLGRGAVFFTNPSNEYTATPELLKDEGYHSSVIHANNKSFWNR 350
BSNT_03709___ 351 DLMYDSFGYDSFFDINSYDVTDENSVGWGLKDKEFFEQSSELMKNLPQPF 400
||:|||||||.||||.|:||.:||||||||||..|||||:||||::||||
BPUM_2214___y 351 DLIYDSFGYDKFFDIKSFDVNEENSVGWGLKDGPFFEQSAELMKSIPQPF 400
BSNT_03709___ 401 YSRLITLTNHFPFDLDEEDQLIDEYDSSSQTLNKYFPTVRYQDEALKRFI 450
|:|||||||||||||||||:|||||||.|:||||:||||||||||||.|.
BPUM_2214___y 401 YTRLITLTNHFPFDLDEEDKLIDEYDSKSKTLNKFFPTVRYQDEALKIFF 450
BSNT_03709___ 451 EKLKEDGLYDNSVIVLYGDHYGISENHNEAMGEFLGKEITPFEEVQLQKV 500
||:||.|||:||:.||||||||||||||||||:||.||||||||||||||
BPUM_2214___y 451 EKMKETGLYENSIFVLYGDHYGISENHNEAMGQFLNKEITPFEEVQLQKV 500
BSNT_03709___ 501 PLVIHIPGITDKKPQTIETVGGQIDIRPTLMNLLGIDTKDQIQFGNDLLS 550
|.|:|||||||:.|:.|:|||||||||||::||||:||..|||||:||||
BPUM_2214___y 501 PFVVHIPGITDQHPKEIDTVGGQIDIRPTILNLLGVDTSKQIQFGHDLLS 550
BSNT_03709___ 551 DEKLDFTVLRDGSFITDQVVYTDGACYDKETGKPLEETKQCEAFADKAKQ 600
.:|.|.||||||||||...|:|||.||:|:||:|.::...|:::.:||||
BPUM_2214___y 551 KDKNDLTVLRDGSFITKDSVFTDGVCYNKKTGEPRDDETVCQSYEEKAKQ 600
BSNT_03709___ 601 ELSLSDEIIYGDLLRFYDQKRLDNS-SKRKEKQMLDQAS 638
||..||:|||||||||||:...|:| ||::::..|.:||
BPUM_2214___y 601 ELQFSDQIIYGDLLRFYDRNSPDHSPSKKEDETKLKKAS 639
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