Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03709 and BPUM_2214
See
Amino acid alignment /
Visit
BSNT_03709 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:14
# Commandline: needle
# -asequence dna-align/BSNT_03709___yqgS.1.24716.seq
# -bsequence dna-align/BPUM_2214___yqgS.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03709___yqgS-BPUM_2214___yqgS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03709___yqgS-BPUM_2214___yqgS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03709___yqgS
# 2: BPUM_2214___yqgS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2002
# Identity: 1372/2002 (68.5%)
# Similarity: 1372/2002 (68.5%)
# Gaps: 167/2002 ( 8.3%)
# Score: 4468.5
#
#
#=======================================
BSNT_03709___ 1 ATGCGAA--AAACGTTTTTTTCGAA----GATTTCATTTATGCTGATTGC 44
||||||| |||.|.|| || ||||||||||.|.||||||||
BPUM_2214___y 1 ATGCGAAAGAAAAGATT------AAAGGCGATTTCATTTTTACTGATTGC 44
BSNT_03709___ 45 CATTTTATTGATGTGGCTGAAAACGTATGCTGTTTACAAAACCAGTTTTC 94
.|.|||..|.||||||.|.|||||.||||.|.|.||.|||.|.||.||..
BPUM_2214___y 45 GACTTTGCTCATGTGGGTCAAAACCTATGTTATCTATAAATCTAGCTTCA 94
BSNT_03709___ 95 ATATTAAAATCGACAATCTAACACAGGAATTTATTCTGTTTATCAACCCA 144
||||||||||.||.|||.|.|..|||||.|||||.||||||||.|||||.
BPUM_2214___y 95 ATATTAAAATAGAAAATTTCATGCAGGAGTTTATCCTGTTTATTAACCCG 144
BSNT_03709___ 145 TTGAGTTTTTTGTTGCTTATTTTCGGCCTCAGCCTGTTTTTAAAAGGCAA 194
.|.||.|||.|.|||.||||.|||||..||.|..|.|||.|.||||..||
BPUM_2214___y 145 CTTAGCTTTCTCTTGTTTATCTTCGGTATCGGTTTATTTATGAAAGAAAA 194
BSNT_03709___ 195 AAACAGAAATCGCTACATTATCGCGATGAGCTGTCTTGTCACGTTTGTAT 244
|||..|.|||||.||.||.||||..|||||||.|.||.|.||.||..|.|
BPUM_2214___y 195 AAATCGCAATCGATATATCATCGTCATGAGCTTTATTTTGACATTCATTT 244
BSNT_03709___ 245 TGCTGGCAAATATGGTTTTTTACCGTTTTTACAATGATTTCTTAACAATC 294
||.|.||.||.||.||.|||||.||.||.||.|.||||||..||||.|||
BPUM_2214___y 245 TGTTAGCTAACATTGTGTTTTATCGATTCTATAGTGATTTTCTAACCATC 294
BSNT_03709___ 295 CCTGTTCTTTTTCAAACGAGCAATATGGGTGATCTCGG---AAGCAGCAT 341
||.||.||.||||||||.|.||||||||||||.||||| |||
BPUM_2214___y 295 CCCGTCCTATTTCAAACAAACAATATGGGTGACCTCGGGTCAAG------ 338
BSNT_03709___ 342 CGGAACACTTCTTGAGCCGACAGACCTCCT--ATT--AGCTGTAGA--TA 385
|.|| |||||.| ||| |.|.||.|| ||
BPUM_2214___y 339 ---------TATT----------ACCTCTTTAATTGAACCAGTCGATTTA 369
BSNT_03709___ 386 TTGCGG----------------TTTTAATATGGCTTCACATCCGGCAAAA 419
|||..| |||||||.|||||..|.| ||||
BPUM_2214___y 370 TTGATGTTCGTGGATATCATCATTTTAATGTGGCTCTATA------AAAA 413
BSNT_03709___ 420 A-------GCTTTTCAATCGGACATTCCC---TCAACGAAAAATGAACGG 459
| .||||..|| ||||.||..|| || ||||||| |||||.
BPUM_2214___y 414 ACAGCCTTCCTTTAGAA-CGGATATCACCATTTC-ACGAAAA--GAACGA 459
BSNT_03709___ 460 GCGGCTTATTTTTTGTTCGTTGC-------TTCTGTTTATTTCTTCAACC 502
||.||.||||.|||.||.||.|| ||| |||||.||||
BPUM_2214___y 460 GCAGCGTATTATTTATTTGTGGCAGCCACTTTC-------TTCTTTAACC 502
BSNT_03709___ 503 TGGGCTTGTCTGAGGCGGAGAGACCTCAGCTATTGACACGCTCTTTTGAC 552
|.||.|||.||||..|.||.|||||..|.||..|.||.|||||.||||||
BPUM_2214___y 503 TAGGTTTGGCTGAAACAGAAAGACCGGAACTGCTCACCCGCTCATTTGAC 552
BSNT_03709___ 553 AGAGAAATGCTTGTTAAAAACATTAGCCTGTTTAATTTTCATATTTACGA 602
.|.||.|||.|.||.|||||.||||||.|.|.||||||.||||||||.||
BPUM_2214___y 553 CGTGAGATGTTGGTGAAAAATATTAGCTTATATAATTTCCATATTTATGA 602
BSNT_03709___ 603 TGGCGTTCTTCAGTCAAAGCAATCCGCACAGAGAGCGTTGGCAGACAGCA 652
||||||..|.||.||.||||||||.||.||..||||..|.||.|||||||
BPUM_2214___y 603 TGGCGTGTTGCAATCGAAGCAATCTGCTCAACGAGCCCTTGCTGACAGCA 652
BSNT_03709___ 653 ACAGCCTGACGGAAATTGAAAACTACGTAACCGCTAAT----GCGAAGG- 697
|.|||.|.||||||||.||||||||.||||.|||.||| .|||..|
BPUM_2214___y 653 ATAGCTTAACGGAAATAGAAAACTATGTAAGCGCAAATCAAACCGATCGT 702
BSNT_03709___ 698 -ATGCCAACAAACGCTTATTCGGCGCTGCAAAAAGAAGGAACGTCATTCT 746
||| ||.|.||| ||.||....||.|||.||.|.||.|||||.||
BPUM_2214___y 703 AATG--AAAAGACG----TTTGGTCAAGCTAAAGGACGAAATGTCATCCT 746
BSNT_03709___ 747 CGTATC-CTTAGAGTCGACGCAAAGCTTCGTGATTAATGAAAAATTGAAT 795
.||.|| ||| |||||.||.||.|||||.|||.|.|||||||||||.|||
BPUM_2214___y 747 TGTCTCACTT-GAGTCTACTCAGAGCTTTGTGGTCAATGAAAAATTAAAT 795
BSNT_03709___ 796 GGAGAAGAAATCACGCCTTTTCTGAATGACTTTATAAAACAGAGCTACAA 845
||..|||||||.||.||.|||||.||..|..|.||.||..|.||||||||
BPUM_2214___y 796 GGGAAAGAAATTACCCCATTTCTAAACAAACTAATCAAGAAAAGCTACAA 845
BSNT_03709___ 846 CTTTAATAATGTTTACCACCAAACAGGCCAGGGGAAAACCTCGGATTCTG 895
|||||.||||.|.||.||.||||||||.||.||.|||||.||.||.||.|
BPUM_2214___y 846 CTTTACTAATTTCTATCATCAAACAGGTCAAGGAAAAACATCAGACTCGG 895
BSNT_03709___ 896 AATTTATCGTGGACAATTCACTGTATCCGCTTGGACGAGGTGCCGTGTTT 945
|.|||||.||.||.||.||.||.||.||.||||||.||||.||.|||||.
BPUM_2214___y 896 AGTTTATTGTTGATAACTCTCTCTACCCACTTGGAAGAGGGGCTGTGTTC 945
BSNT_03709___ 946 TTTACGAATGCGGGCAATCAATATATGGCCGCTCCTGAAATTTTGAA--- 992
||.||.||..|..|.|||.||||||..||..|.|||||..|.||.||
BPUM_2214___y 946 TTCACAAACCCAAGTAATGAATATACAGCGACACCTGAGCTGTTAAAGGA 995
BSNT_03709___ 993 --AAACAGCGGATACTATTCAGCGGTGCTCCACGCTAATAATAAGAGCTT 1040
|| ||.|||.||||..|.||..|.||.||.|||||.||.||.||
BPUM_2214___y 996 TGAA-----GGGTACCATTCTTCTGTTATTCATGCGAATAACAAAAGTTT 1040
BSNT_03709___ 1041 TTGGAATCGTGATTTAATGTACGACTCATTTGGATATGATTCGTTTTTTG 1090
.|||||.|||||..|.||.|||||....|||||.||.||...||||||||
BPUM_2214___y 1041 CTGGAACCGTGACCTCATCTACGATAGCTTTGGCTACGACAAGTTTTTTG 1090
BSNT_03709___ 1091 ATATTAACTCGTATGATGTAACTGACGAAAATTCAGTCGGCTGGGGACTG 1140
|||||||.||.|.||||||.|.|||.||.||.|||||.||||||||..||
BPUM_2214___y 1091 ATATTAAATCATTTGATGTGAATGAAGAGAACTCAGTTGGCTGGGGCTTG 1140
BSNT_03709___ 1141 AAGGATAAAGAATTTTTTGAGCAGTCTTCAGAGCTGATGAAA--AATCTG 1188
||.|||.....|||.|||||.|||||..|.||..|||||||| ||||
BPUM_2214___y 1141 AAAGATGGTCCATTCTTTGAACAGTCAGCGGAATTGATGAAATCAATC-- 1188
BSNT_03709___ 1189 CCTCAGCCGTTTTACTCGAGGCTGATTACACTGACGAACCACTTCCCGTT 1238
||.|||||.||.||..||||..||||||||.|.|||||.|||||.||.||
BPUM_2214___y 1189 CCGCAGCCTTTCTATACGAGATTGATTACATTAACGAATCACTTTCCATT 1238
BSNT_03709___ 1239 TGATCTTGATGAAGAGGATCAATTGATTGATGAATATGATTC-AAGCAGC 1287
||||.|.||||||||.|||.|..|.||||||||||||||||| ||| |||
BPUM_2214___y 1239 TGATTTAGATGAAGAAGATAAGCTTATTGATGAATATGATTCTAAG-AGC 1287
BSNT_03709___ 1288 CAGACGCTAAATAAATATTTTCCGACAGTGCGTTATCAGGATGAGGCGCT 1337
.|.|||.||||.||.|..|||||||||||.||.|||||.|||||||||||
BPUM_2214___y 1288 AAAACGTTAAACAAGTTCTTTCCGACAGTTCGATATCAAGATGAGGCGCT 1337
BSNT_03709___ 1338 GAAACGGTTTATC---GAAAAGCTGAAGGAAGAC-GGGTTATACGACAAC 1383
||| |.||.|| |||||..|||||||| || ||.||.|||||.|||
BPUM_2214___y 1338 GAA---GATTTTCTTTGAAAAAATGAAGGAA-ACAGGTTTGTACGAAAAC 1383
BSNT_03709___ 1384 TCTGTTATTGTATTATATGGTGACCATTATGGTATATCAGAAAACCATAA 1433
||..|..||||.||||||||.||.||.|||||.||.||||||||||||||
BPUM_2214___y 1384 TCCATCTTTGTTTTATATGGGGATCACTATGGAATTTCAGAAAACCATAA 1433
BSNT_03709___ 1434 TGAAGCGATGGGGGAGTTTTTAGGAAAAGAAATAACCCCATTTGAAGAGG 1483
.|||||.|||||..|.||||||...|||||.||.||.|||||||||||.|
BPUM_2214___y 1434 CGAAGCAATGGGACAATTTTTAAATAAAGAGATTACGCCATTTGAAGAAG 1483
BSNT_03709___ 1484 TGCAGCTCCAAAAAGTGCCGCTGGTCATTCATATTCCGGGTATTACTGAT 1533
|.|||||.|||||||||||..|.||..|.||.|||||.||.||.||.|||
BPUM_2214___y 1484 TACAGCTTCAAAAAGTGCCATTTGTTGTACACATTCCAGGGATCACAGAT 1533
BSNT_03709___ 1534 AAAAAGCCGCAAACCATTGAAACAGTAGGCGGGCAGATTGATATCAGGCC 1583
.||.|.||..||...|||||.||.||||||||.||.||||||||..|.||
BPUM_2214___y 1534 CAACATCCAAAAGAAATTGATACGGTAGGCGGACAAATTGATATTCGTCC 1583
BSNT_03709___ 1584 GACGCTGATGAATCTTTTAGGGATTGATACGAAAG--ATCAAATTCAATT 1631
.||..|..|.|||||||||||..|.||||| ||| |.|||||||||||
BPUM_2214___y 1584 AACTATACTCAATCTTTTAGGAGTCGATAC--AAGTAAACAAATTCAATT 1631
BSNT_03709___ 1632 CGGCAACGATCTGCTTTCAGACGA-AAAACTGGACTTCACGGTGCTCCGG 1680
.||..|.|||||..|.|||.|.|| ||.|.| ||.||.||||||||.||.
BPUM_2214___y 1632 TGGTCATGATCTTTTATCAAAAGATAAGAAT-GATTTAACGGTGCTTCGT 1680
BSNT_03709___ 1681 GACGGGAGCTTTATCAC--AGATCAGGTTGTTTATACAGACGGTGCGTGT 1728
||.||.||||||||.|| ||..||| |||||..|||||.||||..||.
BPUM_2214___y 1681 GATGGCAGCTTTATTACGAAGGACAG--TGTTTTCACAGATGGTGTTTGC 1728
BSNT_03709___ 1729 TATGACAAAGAGACGGGAAAACCGTTAGAAGAGACAAAACAA-----TGT 1773
||..|.|||.|.|||||..|.|| ||||||..|....| |||
BPUM_2214___y 1729 TACAATAAAAAAACGGGTGAGCC-----AAGAGATGATGAGACTGTTTGT 1773
BSNT_03709___ 1774 GAAGCATTTGCTGATAAAGCAAAACAGGAGCTATCACTT-TCTGATGAAA 1822
.||.|.|.||..||.||.|||||.||.||||| .||.|| ||||||.|.|
BPUM_2214___y 1774 CAATCTTATGAAGAGAAGGCAAAGCAAGAGCT-CCAATTCTCTGATCAGA 1822
BSNT_03709___ 1823 TCATTTATGGGGATTTGTTGCGATTTTATGACCAGAAAAGGCTGGACAAT 1872
|.||.||.||||||.|..|..||||||||||||.|||.||.|.|||..||
BPUM_2214___y 1823 TTATCTACGGGGATCTCCTTAGATTTTATGACCGGAACAGCCCGGATCAT 1872
BSNT_03709___ 1873 T---CGTCAAAACGGAAAGAA----AAACAAATGCTTGATCAGGCATCAT 1915
| |.||.||| |||||| ||||.|| |||..|..||||.||.|
BPUM_2214___y 1873 TCTCCATCCAAA---AAAGAAGATGAAACGAA-GCTGAAAAAGGCGTCCT 1918
BSNT_03709___ 1916 AA 1917
||
BPUM_2214___y 1919 AA 1920
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.