Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03706 and BPUM_2213
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:14
# Commandline: needle
# -asequence pep-align/BSNT_03706___yqgT.1.24716.seq
# -bsequence pep-align/BPUM_2213___yqgT.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03706___yqgT-BPUM_2213___yqgT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03706___yqgT-BPUM_2213___yqgT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03706___yqgT
# 2: BPUM_2213___yqgT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 384
# Identity: 174/384 (45.3%)
# Similarity: 234/384 (60.9%)
# Gaps: 19/384 ( 4.9%)
# Score: 825.0
#
#
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BSNT_03706___ 1 ---MAFITVKPEI-KNNLANVAKELKIDEELLKSANRSAQKHQLYCPGYV 46
.:|..::.:: :....:|||:|.|.......:|:.:.:: |..|||.
BPUM_2213___y 1 MKTTSFGKIEWQLDEEEKDHVAKQLGIGNAAFHLSNQISTEY-LLLPGYR 49
BSNT_03706___ 47 IEE--HSGKELQTIQDIKRFLQPRQLKLSDSWIEQEKIYDDSAVEKEIKK 94
:.| || ..:|.::::|:.|.:|:.||.||.....||.:.:|:|:.:
BPUM_2213___y 50 LPEGIHS---FSSIGELQKFIAPYRLQQSDEWINGTFEYDSAQLEEELSR 96
BSNT_03706___ 95 IIDVFPFVSCREIGRSVLGRPIWELKAGGEHAVKKVHMNASFHANEWITT 144
:...|||:....||.|||..||:|::......:..:|:||||||||||||
BPUM_2213___y 97 LKAAFPFLQISVIGHSVLDTPIYEIRTEPVQHLHSIHLNASFHANEWITT 146
BSNT_03706___ 145 SVLLKWLKEYCMSLCCNSPFFG--FSPIKLFNSTSLSLVPLVNPDGVDLV 192
|||:||:|..| |..:.|... ...|.:..:|:||:||:|||||||||
BPUM_2213___y 147 SVLIKWMKSLC--LAASDPVQARHHEAIHILRTTALSIVPMVNPDGVDLV 194
BSNT_03706___ 193 LNGSEVMGARRDELERLNEHRPNFNEWKANINGVDLNKQFPSLWEIEKYR 242
.||.|.:|...:|...|.....::.||||||.|||||.|||:.||||.||
BPUM_2213___y 195 RNGPESLGLSSEEFTPLLGRYADYQEWKANIRGVDLNNQFPAYWEIEYYR 244
BSNT_03706___ 243 KPT-APSYRDFPGISPLTEPESIAMYRLITENPPDRLLALHTQGEEIYWG 291
..| |||.|.|||..||||||:.||..|......|||:||||||||||||
BPUM_2213___y 245 HETKAPSNRGFPGYKPLTEPEAKAMANLALRKRFDRLVALHTQGEEIYWG 294
BSNT_03706___ 292 YKGLEPEESAAVIKDFEELSGNIYKGVRDIDSYAGFRDWFIHHYFKEGYT 341
:.|.||..|...:|.||::|| ||.|:.:|||||:|||||:....||||
BPUM_2213___y 295 FLGHEPAISKETVKRFEQVSG--YKPVQYLDSYAGYRDWFIYQCHNEGYT 342
BSNT_03706___ 342 VELGKGQNPLPFQQFSHIYNATNGILWRALFFHE 375
||||.|:|||...||..||..|..:||.|...
BPUM_2213___y 343 VELGLGKNPLSMNQFDTIYEKTKRLLWEACKC-- 374
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