Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04935 and BPUM_2212
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:40
# Commandline: needle
# -asequence pep-align/BSNT_04935___yvqJ.1.24716.seq
# -bsequence pep-align/BPUM_2212___yvqJ2.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04935___yvqJ-BPUM_2212___yvqJ2.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04935___yvqJ-BPUM_2212___yvqJ2.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04935___yvqJ
# 2: BPUM_2212___yvqJ2
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 491
# Identity: 242/491 (49.3%)
# Similarity: 320/491 (65.2%)
# Gaps: 76/491 (15.5%)
# Score: 1264.5
#
#
#=======================================
BSNT_04935___ 0 -------------------------------------------------- 0
BPUM_2212___y 1 MRKQSDCYGKHVSVKKHLSGAFLHLNMKQFLIVNKNNDRVIDEGHLVSYC 50
BSNT_04935___ 1 -------------MVNLIESDSIWKRNFNYLFFSRIVKISGDMFAFNSIL 37
...|:.:.|:|||||:|||.|::.||:.|..:||:||
BPUM_2212___y 51 ERCGCKKKDMFLGRCRLLSAQSLWKRNFSYLFMSKMCKITADSLSFNTIL 100
BSNT_04935___ 38 WFLIYDGKGAIGTALLIAVTFLPEAVLAPVTGPFMKQTTLKFWMYFSDLT 87
|.|:..||||||||..|||:|:|:|::.|:..|.||...|||||.|:|||
BPUM_2212___y 101 WLLVLGGKGAIGTAFFIAVSFVPQAIVGPLITPMMKPHQLKFWMCFADLT 150
BSNT_04935___ 88 RAAIVLIIPLCHFAGFSPLWFVMTLMIVHSATGAAYNPASIALIPQIVNE 137
|.||:|:|.:.:|.||:||..|:..|::|||||.:|.|||:::||::|:|
BPUM_2212___y 151 RGAIILVIVISYFYGFTPLALVIGCMLLHSATGGSYEPASVSIIPKLVHE 200
BSNT_04935___ 138 QGIQKANAVLQSSAQIVRLGAVTLCGAFLTFISPSYTMLIALVLYLVSGF 187
..||||||.:||::.:|||..||:||..:.|:...||||:.:.|||:|..
BPUM_2212___y 201 DLIQKANATIQSASHVVRLVTVTVCGVMIAFVGVGYTMLVIIPLYLLSAL 250
BSNT_04935___ 188 LVLFIKYTAVESQSESAVVTQRG----TYIGRLKRGFRLVRKHQILYPLA 233
||:.|.| |:.::..:. :|..||.|||.|||||.||:|||
BPUM_2212___y 251 LVVIITY-------ETEIIIDQAKKGLSYGKRLIRGFSLVRKHHILFPLA 293
BSNT_04935___ 234 IYCIFMNFAAAPWEALSAVYVAEDLNGEPIVYSLLKATTAGGAFLLGFVL 283
|:|:..|||||||||||.:|:.|||:..|::|||:|.|||.||||:||||
BPUM_2212___y 294 IFCVCSNFAAAPWEALSVIYLTEDLHSGPVIYSLIKVTTALGAFLMGFVL 343
BSNT_04935___ 284 AKVKVNRYGLLFVTAGIIEGFAFFITGMNTFLPLVFFAAFTFGAAVSAVN 333
.|||||||||||:.|||::|.:|||||||.||||||.:||..|||:||||
BPUM_2212___y 344 TKVKVNRYGLLFIGAGIVDGISFFITGMNAFLPLVFISAFALGAAISAVN 393
BSNT_04935___ 334 VPEYTIIQTSVDSEDQPQVYAVIHMISNISIPAGAVICGYAANAFGSGTV 383
|||:|:||.||.:||||||||:|:|||...||.||:|.||.|..||||.|
BPUM_2212___y 394 VPEHTMIQLSVKAEDQPQVYAIINMISFFMIPLGALIGGYMATRFGSGYV 443
BSNT_04935___ 384 IAAGGIVEIIAGIGILLFTKLAKAERSDLIKERE-ASVHL- 422
||||||:|.::||.:||||.:.|.|||||..||: .|::.
BPUM_2212___y 444 IAAGGIIEAVSGICLLLFTNIGKVERSDLTIERDKPSLNAT 484
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