Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03695 and BPUM_2206

See DNA alignment / Visit BSNT_03695 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:13
# Commandline: needle
#    -asequence pep-align/BSNT_03695___yqhA.1.24716.seq
#    -bsequence pep-align/BPUM_2206___yqhA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03695___yqhA-BPUM_2206___yqhA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03695___yqhA-BPUM_2206___yqhA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03695___yqhA
# 2: BPUM_2206___yqhA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 291
# Identity:     148/291 (50.9%)
# Similarity:   207/291 (71.1%)
# Gaps:          14/291 ( 4.8%)
# Score: 746.5
# 
#
#=======================================

BSNT_03695___      1 -----MIALDQHLTEHKEDITQQWLEVCTSKGSWLYSAKDQQKLEQKLKD     45
                          ...|.:.:.:....:|::||:..|.:|| |||....::.|:|||:
BPUM_2206___y      1 MKNEKSKQLYEFILKEAPVMTEEWLKTRTEEGS-LYSKHASEETEKKLKE     49

BSNT_03695___     46 QHELLVTIVAKSL--RKEDVEDELNRWSLQCARDRAVHEVTVTQSVGHFN     93
                     |:...:..:|.:|  ..:.||:.|.:||:..|||||||||.:.:.:|.|.
BPUM_2206___y     50 QNTAFIQTIAATLVTLSDKVENHLKKWSVDIARDRAVHEVPLYEIIGQFK     99

BSNT_03695___     94 TFRHIMFEWIQKFSEASSQDISIQEFYEWSRILNQNIDEIIEVFTEEYHQ    143
                     .||||....|:.|::.:..::::|:..:|::..:...|::||..:|||.:
BPUM_2206___y    100 IFRHIFCSRIETFTQETELEVTLQDVCQWNQHFHATFDDMIERLSEEYDR    149

BSNT_03695___    144 VTMIQLNAQKEMINELSAPIMPITDGIGILPLVGEIDTHRARTILESVLE    193
                     ||:.|||||:|||.|||||::|::..||||||:|||||:||:.|||||||
BPUM_2206___y    150 VTLSQLNAQREMIQELSAPVIPVSKEIGILPLIGEIDTYRAKIILESVLE    199

BSNT_03695___    194 QCSALKLSYLFLDISGVPIVDTMVAYQIFKVIDSTKLLGIETIISGIRPE    243
                     |.|.|:|::||:||||||:||||||||:|||:||.|||||||||||||||
BPUM_2206___y    200 QASRLRLTHLFIDISGVPVVDTMVAYQLFKVVDSAKLLGIETIISGIRPE    249

BSNT_03695___    244 IAQTVVKLGLDFSNVKTEQSLAKALANKGFKIKEC------    278
                     |||||||||:|||.|.||.||||||..:||:|.|.      
BPUM_2206___y    250 IAQTVVKLGIDFSKVNTEHSLAKALEKRGFRIFEEQQQEAT    290


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