Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03682 and BPUM_2202

See DNA alignment / Visit BSNT_03682 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:13
# Commandline: needle
#    -asequence pep-align/BSNT_03682___comGD.1.24716.seq
#    -bsequence pep-align/BPUM_2202___comGD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03682___comGD-BPUM_2202___comGD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03682___comGD-BPUM_2202___comGD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03682___comGD
# 2: BPUM_2202___comGD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 149
# Identity:      38/149 (25.5%)
# Similarity:    70/149 (47.0%)
# Gaps:          24/149 (16.1%)
# Score: 174.5
# 
#
#=======================================

BSNT_03682___      1 MNIKLNEEKGFTLLESLLVLSLASILLIAVFTTLPPAYDNTAVRQAARQL     50
                                      ::|.:.|||::.:...:|...:....::....:
BPUM_2202___c      1 -----------------MILLVLSILMLIIGVKIPNVIEGAEAKRQVNIM     33

BSNT_03682___     51 KNDIMLTQQTAISRQQRTKILFH--KKEYQLV---IGDTVIERPYATGLS     95
                     |.|..|...||..::.|..:.||  ...||::   .|:.:....:..| |
BPUM_2202___c     34 KQDFQLAAYTAFVKKTRVYVEFHLPHVSYQIIDQKDGEVIASFQHQKG-S     82

BSNT_03682___     96 IELLTLKDRLEFNEKGHPNAGGKIRVK-GHAVYDITVYLGSGRVNVERK    143
                     |:..|....:.||..|||::||.:.:: |...|.:|:||||||::|::|
BPUM_2202___c     83 IKASTFPQGIYFNVNGHPSSGGSLIIQFGSQTYKLTIYLGSGRIHVQKK    131


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