Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03681 and BPUM_2201

See DNA alignment / Visit BSNT_03681 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:13
# Commandline: needle
#    -asequence pep-align/BSNT_03681___comGE.1.24716.seq
#    -bsequence pep-align/BPUM_2201___comGE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03681___comGE-BPUM_2201___comGE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03681___comGE-BPUM_2201___comGE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03681___comGE
# 2: BPUM_2201___comGE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 116
# Identity:      28/116 (24.1%)
# Similarity:    62/116 (53.4%)
# Gaps:          12/116 (10.3%)
# Score: 137.0
# 
#
#=======================================

BSNT_03681___      1 MWRENKGFSTIETMSALSLWLFVLLTVVPLWDKLIADEKMAESREIGYQM     50
                     |::.|:|||||||:.|..::|||.:.::|.::|::..:|...::...||:
BPUM_2201___c      1 MFKRNRGFSTIETLFACHIFLFVAIVLMPAYEKIMLGKKEVRAKLEAYQI     50

BSNT_03681___     51 MNESISKYVMSGEGAASKTITKNNHIYAMKW-EEEGEYQNVCIKATAYKE     99
                     ::|.:::..:.|..::.|. .:.:..|...| :|:|     |:....:|:
BPUM_2201___c     51 LHEQMNESFIDGTKSSVKK-KRGDITYVFNWGKEKG-----CVSYNLHKK     94

BSNT_03681___    100 KSYCLSILQTEWLYAS    115
                     ::.|.......     
BPUM_2201___c     95 QTICFHQADER-----    105


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