Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03680 and BPUM_2200

See DNA alignment / Visit BSNT_03680 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:13
# Commandline: needle
#    -asequence pep-align/BSNT_03680___comGF.1.24716.seq
#    -bsequence pep-align/BPUM_2200___comGF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03680___comGF-BPUM_2200___comGF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03680___comGF-BPUM_2200___comGF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03680___comGF
# 2: BPUM_2200___comGF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 159
# Identity:      36/159 (22.6%)
# Similarity:    62/159 (39.0%)
# Gaps:          42/159 (26.4%)
# Score: 150.5
# 
#
#=======================================

BSNT_03680___      1 ---------------------------MLISGSLAAIFHLFLSRQQEHDG     23
                                                :|.|.:..|  |.|    :|.:.
BPUM_2200___c      1 MNGEQGFTLVQALWQLQLFLFLSFGCVLLFSTATKA--HPF----EEMNR     44

BSNT_03680___     24 FTQQEWMISIEQMMNECKESQAVKTAEHGSVLICTNLSGQDIRFEIYHSM     73
                     |:|.||..::.|:..|...:.|:::.:.|..|...:..|:.:..|.|..|
BPUM_2200___c     45 FSQMEWKQTVLQLDEELSRATAIRSVQGGKALEYVSDQGRVVTIEPYQEM     94

BSNT_03680___     74 IRKRVDGKGHVPILDHITAMKADIENGVVLLKIESEDQKVYQTAFPVYSY    123
                     :|||:|..||:|:|..:...:........:||:..|..|||:..|.:|. 
BPUM_2200___c     95 LRKRMDQAGHLPLLQKVKECRVRTNQYRAILKVTDESGKVYEAVFFIYK-    143

BSNT_03680___    124 LGGG-----    127
                        |     
BPUM_2200___c    144 ---GVVPTL    149


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