Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03673 and BPUM_2196

See DNA alignment / Visit BSNT_03673 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:12
# Commandline: needle
#    -asequence pep-align/BSNT_03673___yqxM.1.24716.seq
#    -bsequence pep-align/BPUM_2196___yqxM.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03673___yqxM-BPUM_2196___yqxM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03673___yqxM-BPUM_2196___yqxM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03673___yqxM
# 2: BPUM_2196___yqxM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 257
# Identity:      73/257 (28.4%)
# Similarity:   113/257 (44.0%)
# Gaps:          86/257 (33.5%)
# Score: 389.5
# 
#
#=======================================

BSNT_03673___      1 MFRLFYNQQKAKTKLKVLLIFQLSVIFSLTAAICLQFS----DDTSAAFH     46
                                          ....:|.|..||.|.|:    ..|:|:|:
BPUM_2196___y      1 ---------------------MKQSLFVLFCAIFLIFTSLLISTTNASFN     29

BSNT_03673___     47 DIETFDVSLQTCKDFQHTDKNCHYDKRWDQSDLHISDQTDTKGTVCSPFA     96
                     |:|..:..::||::|:.||::|...| ||:|||.:.|||..|||||:|.:
BPUM_2196___y     30 DVEHSNFVMKTCENFEQTDQHCQPIK-WDRSDLELIDQTMIKGTVCAPQS     78

BSNT_03673___     97 LFAVLENTGEKLKKSKWKWELHKLENARKPLKDGNVIEKGFVSNQIGDSL    146
                     |...|:|:|:.:..|:|||||||:::.:|||:||:::|||.:.:.:....
BPUM_2196___y     79 LSITLKNSGQPIAHSEWKWELHKVKSEQKPLQDGHILEKGSIQSLLSQET    128

BSNT_03673___    147 YKIETKKKMKPGIYAFKVYKPAGYPANGSTFEWSEPMTLAKCDEKPTVPK    196
                     ..:.|.|....|||.||:|.|.|:..:...|.||:||.||||.||.:   
BPUM_2196___y    129 TTVTTDKAKTNGIYTFKIYYPKGFEGSEEAFIWSKPMQLAKCPEKVS---    175

BSNT_03673___    197 KETKSDVKKENETTQKDIQEKTMKEETSQEAVTKENETQSDQKESGEEDE    246
                                                                       
BPUM_2196___y    175 --------------------------------------------------    175

BSNT_03673___    247 KSNEADQ    253
                            
BPUM_2196___y    175 -------    175


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