Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03672 and BPUM_2195
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:12
# Commandline: needle
# -asequence pep-align/BSNT_03672___sipW.1.24716.seq
# -bsequence pep-align/BPUM_2195___sipW.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03672___sipW-BPUM_2195___sipW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03672___sipW-BPUM_2195___sipW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03672___sipW
# 2: BPUM_2195___sipW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 196
# Identity: 92/196 (46.9%)
# Similarity: 128/196 (65.3%)
# Gaps: 12/196 ( 6.1%)
# Score: 451.5
#
#
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BSNT_03672___ 1 ----MKLISNILYVIIFTLIIVLTLVVISTRSSGGEPAVFGYTLKSVLSG 46
||:..:||||::||::|...:||:|:|::||:|.:|||..|.||||
BPUM_2195___s 1 MKKWMKMSGSILYVVVFTVMIACIIVVLSSRTTGGDPQIFGYQFKQVLSG 50
BSNT_03672___ 47 SMEPEFNTGSLILVKEIADVKELQKGDVITFM--QDANTAVTHRIVDITK 94
||||||:|||||:|||:...:.|:|||:|||. || .:.||||||.:..
BPUM_2195___s 51 SMEPEFSTGSLIVVKEVTSPESLKKGDIITFQTKQD-QSYVTHRIVGVKG 99
BSNT_03672___ 95 QGDHLLFKTKGDNNAAADSAPVSDENVRAQYTGFQLPYAGYMLHFASQPI 144
:|.:..|:||||.|...|...|..:.|.|||||..:||||.:|.:|....
BPUM_2195___s 100 KGSNKAFETKGDQNMYQDGTLVKADQVTAQYTGMNIPYAGKLLSYAGTSA 149
BSNT_03672___ 145 GTAVLLIVPGVMLLVYAFVTISSAIREIERKTKALETDTKDSTMST 190
|||:|||:||||||||:.:....|.:. .|.|..|:...:.:
BPUM_2195___s 150 GTALLLIIPGVMLLVYSTLHFVGAAKH-RRHTADLQMSEEQA---- 190
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