Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03670 and BPUM_2193

See DNA alignment / Visit BSNT_03670 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:12
# Commandline: needle
#    -asequence pep-align/BSNT_03670___sinR.1.24716.seq
#    -bsequence pep-align/BPUM_2193___sinR.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03670___sinR-BPUM_2193___sinR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03670___sinR-BPUM_2193___sinR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03670___sinR
# 2: BPUM_2193___sinR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 113
# Identity:     104/113 (92.0%)
# Similarity:   106/113 (93.8%)
# Gaps:           2/113 ( 1.8%)
# Score: 522.0
# 
#
#=======================================

BSNT_03670___      1 MTLIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLE     50
                       :|||||||||.|||||||||||||||||||||||||||||||||||||
BPUM_2193___s      1 --MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLE     48

BSNT_03670___     51 KVSAVLDVSVHTLLDEKHETEYDGQLDSEWEKLVRDAMTSGVSKKQFREF    100
                     ||||||||||||||.||.||||||||||||||||||||||||||||||||
BPUM_2193___s     49 KVSAVLDVSVHTLLHEKDETEYDGQLDSEWEKLVRDAMTSGVSKKQFREF     98

BSNT_03670___    101 LDYQKWRKSQKEE    113
                     ||||.|||.|:||
BPUM_2193___s     99 LDYQIWRKKQEEE    111


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