Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03666 and BPUM_2190
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:12
# Commandline: needle
# -asequence pep-align/BSNT_03666___yqhH.1.24716.seq
# -bsequence pep-align/BPUM_2190___yqhH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03666___yqhH-BPUM_2190___yqhH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03666___yqhH-BPUM_2190___yqhH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03666___yqhH
# 2: BPUM_2190___yqhH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 559
# Identity: 405/559 (72.5%)
# Similarity: 474/559 (84.8%)
# Gaps: 5/559 ( 0.9%)
# Score: 2116.5
#
#
#=======================================
BSNT_03666___ 1 MNTEMIYDAKWPEEFAERLKNDGPWANWELYKLSAEIQKTLAIPDFEGLR 50
||.:.|:|..|..||.:||..||||||||:|:|:|:|||..||..||||:
BPUM_2190___y 1 MNIQTIFDQDWASEFQQRLAADGPWANWEMYRLAAQIQKITAIDSFEGLQ 50
BSNT_03666___ 51 APLYLPSFTPLPHQLEVAQKVVEKMNGKAILADEVGLGKTVEAGLILKEY 100
||.:||:||||.||||||::|||:||||||||||||||||||||||:|||
BPUM_2190___y 51 APAHLPAFTPLKHQLEVARRVVEEMNGKAILADEVGLGKTVEAGLIIKEY 100
BSNT_03666___ 101 MIRGLAKKILILVPASLVSQWVKELQEKFLIPAVEQKKSYVWEQCDIVVS 150
||||||||||||||||||||||:||:.||.|.||||||||||||||:|||
BPUM_2190___y 101 MIRGLAKKILILVPASLVSQWVQELRTKFYIDAVEQKKSYVWEQCDVVVS 150
BSNT_03666___ 151 SIDTAKRSPHREIVLSIPYDLVIIDEAHKLKNSKTKNYEFVRNLVKKYCL 200
|||||||.|||:.:|||.||:|||||||||||:|||||||||||.||:||
BPUM_2190___y 151 SIDTAKRQPHRDTILSIAYDMVIIDEAHKLKNNKTKNYEFVRNLNKKFCL 200
BSNT_03666___ 201 LLTATPIQNRIEEIFNLVSLLKPGHLGSQNHFQEEFAKKKSSLEAHEHLK 250
|||||||||||.|||||||||||||||:::.|::.||||...||.|:.||
BPUM_2190___y 201 LLTATPIQNRIGEIFNLVSLLKPGHLGNEHQFKDVFAKKDLQLEDHDRLK 250
BSNT_03666___ 251 DLVNKVMIRNRRHDTGLNWKQRHVETVPIEFSPSEQALYDEISRLKESIN 300
.|||||||||||.|||:.|.:|||:|:.|:|||:||||||||.:|||:.:
BPUM_2190___y 251 QLVNKVMIRNRRQDTGIEWTKRHVKTISIDFSPTEQALYDEICKLKENPS 300
BSNT_03666___ 301 KPASMFSIMTLQRECCSSREAVYMTLKKMLDQKEKQAPAIDEDTISVLID 350
....|||||||:|||||||||||||:||| :|.:...:....|:.:::
BPUM_2190___y 301 YTKHMFSIMTLERECCSSREAVYMTIKKM---QEDEKHILGSSAIAQIME 347
BSNT_03666___ 351 RINQVTQNSKALQVVDLIKKIDDKVIIFTEYRATQIYLQWFLQQNGISSV 400
:||:|.||:|||:||.||:::::|||||||||||||||||||||||||||
BPUM_2190___y 348 KINEVQQNTKALEVVKLIQQLNEKVIIFTEYRATQIYLQWFLQQNGISSV 397
BSNT_03666___ 401 PFRGGFKRGKKDWMKDLFRGKIQVLIATEAGGEGINLQFCNHMINYDLPW 450
|||||||||||||||||||.:.|||||||||||||||||||.:|||||||
BPUM_2190___y 398 PFRGGFKRGKKDWMKDLFRERAQVLIATEAGGEGINLQFCNQIINYDLPW 447
BSNT_03666___ 451 NPMRLEQRIGRIHRLGQERDVHIYNMATKHTVEEHILKLLYEKIHLFEKV 500
||||||||||||||||||||||||||||..||||||||||||||.|||.|
BPUM_2190___y 448 NPMRLEQRIGRIHRLGQERDVHIYNMATNGTVEEHILKLLYEKIQLFENV 497
BSNT_03666___ 501 VGELDDILTKIQVNNFEEHLHDILYHSATEEEMKIKMDNLTSFLSYKKQQ 550
:|:||||||:|.:.:.|..||.||:...::.:||.|:....|:|:..|..
BPUM_2190___y 498 IGDLDDILTRIDIKDAETKLHQILFQHESDGDMKKKLTQFASYLTEAKTP 547
BSNT_03666___ 551 PAEKR--GS 557
..||| ||
BPUM_2190___y 548 LLEKRQQGS 556
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