Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03664 and BPUM_2188
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:12
# Commandline: needle
# -asequence pep-align/BSNT_03664___gcvPA.1.24716.seq
# -bsequence pep-align/BPUM_2188___gcvPA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03664___gcvPA-BPUM_2188___gcvPA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03664___gcvPA-BPUM_2188___gcvPA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03664___gcvPA
# 2: BPUM_2188___gcvPA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 448
# Identity: 362/448 (80.8%)
# Similarity: 401/448 (89.5%)
# Gaps: 0/448 ( 0.0%)
# Score: 1873.0
#
#
#=======================================
BSNT_03664___ 1 MKHRYLPATEKDKQEMLATIGVSSIDDLFADIPENVKYKKEYQIKKAKSE 50
|||||||.||:|::|||..|||.|||:||:||||.|::|..|.||.|.||
BPUM_2188___g 1 MKHRYLPQTEQDQKEMLDVIGVQSIDELFSDIPEKVRFKGAYNIKPAASE 50
BSNT_03664___ 51 TELTRELTKLASKNCDTVQYASFLGAGVYDHYQPVIVDHVISRSEFYTAY 100
|||.|||::||:||.|||.|||||||||||||||||||||||||||||||
BPUM_2188___g 51 TELVRELSQLAAKNKDTVSYASFLGAGVYDHYQPVIVDHVISRSEFYTAY 100
BSNT_03664___ 101 TPYQPEISQGELQAIFEFQTMICELTGMDIANSSMYDGGTALAEAAMLAS 150
||||||||||||||||||||||.||||||:|||||||||||||||||||:
BPUM_2188___g 101 TPYQPEISQGELQAIFEFQTMIAELTGMDLANSSMYDGGTALAEAAMLAA 150
BSNT_03664___ 151 GHTKKKKIVVSKTVHPESREVLKTYAKGQYIDVVEVPAADGVTDLDALRQ 200
|||||||:|||:|||||:|.|||||||||:|:||||||..|.|||.||.:
BPUM_2188___g 151 GHTKKKKVVVSETVHPEARAVLKTYAKGQHIEVVEVPAKKGQTDLAALEK 200
BSNT_03664___ 201 TVCENTAAVIVQYPNFFGRIEPLKDIEPIAHQGKSMFIVSANPLALGLLT 250
.||:.||||:||||||||.:|||||||||||:|||:|:||:|||||||||
BPUM_2188___g 201 AVCDETAAVLVQYPNFFGVVEPLKDIEPIAHKGKSLFVVSSNPLALGLLT 250
BSNT_03664___ 251 PPGKFQSDIVVGDAQPFGIPSAYGGPHCGFFAVTKKLMRKVPGRLVGQTE 300
||||..:|||||||||||||:|:||||||:||||||||||||||||||||
BPUM_2188___g 251 PPGKLGADIVVGDAQPFGIPAAFGGPHCGYFAVTKKLMRKVPGRLVGQTE 300
BSNT_03664___ 301 DENGKRGFVLTLQAREQHIRRDKATSNICSNQALNALAASVAMTALGKNG 350
||||.|||||||||||||||||||||||||||||||||||||||||||.|
BPUM_2188___g 301 DENGVRGFVLTLQAREQHIRRDKATSNICSNQALNALAASVAMTALGKTG 350
BSNT_03664___ 351 VKDIARQNLLKANYAKQEAKKAGLTVMFDGPIFNEFVIKLDEPVRAVNKR 400
:||||.||:.||:|||.:|:..||....:|..||||||||.|||:.||||
BPUM_2188___g 351 IKDIAYQNVQKAHYAKTQAETYGLLADVEGTHFNEFVIKLQEPVQEVNKR 400
BSNT_03664___ 401 LLAKGMIGGYDLGLTYPELDCHMLIAVTELRTKEEIDALIQELGDRHE 448
||.||:|||||||..||||..|||:||||||||||||..|:|||||||
BPUM_2188___g 401 LLEKGIIGGYDLGRDYPELQHHMLVAVTELRTKEEIDTFIKELGDRHE 448
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