Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03663 and BPUM_2187
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:11
# Commandline: needle
# -asequence pep-align/BSNT_03663___gcvPB.1.24716.seq
# -bsequence pep-align/BPUM_2187___gcvPB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03663___gcvPB-BPUM_2187___gcvPB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03663___gcvPB-BPUM_2187___gcvPB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03663___gcvPB
# 2: BPUM_2187___gcvPB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 499
# Identity: 431/499 (86.4%)
# Similarity: 457/499 (91.6%)
# Gaps: 14/499 ( 2.8%)
# Score: 2284.0
#
#
#=======================================
BSNT_03663___ 1 -----------MSNQDQALIFELSREGRIGYSLPELDVPEIELGDLLSDT 39
|:.|||.||||||:|||||||||:|||||.|:..|..:|
BPUM_2187___g 1 MIRSLRNWGIAMNKQDQPLIFELSKEGRIGYSLPDLDVPEQEIPSLFDET 50
BSNT_03663___ 40 YIRDEDAALPEVSELDIMRHYTALSKRNHGVDSGFYPLGSCTMKYNPKIN 89
|||.|||.|||||||||||||||||:||||||||||||||||||||||||
BPUM_2187___g 51 YIRHEDAELPEVSELDIMRHYTALSRRNHGVDSGFYPLGSCTMKYNPKIN 100
BSNT_03663___ 90 EKIARIPGFAAIHPLQDEDTVQGALELLYDLSKHLEEITGMDEVTLQPAA 139
||:||:.|||.:||||:.|||||||||||||..|||||||||.|||||||
BPUM_2187___g 101 EKVARLAGFAQVHPLQEADTVQGALELLYDLGDHLEEITGMDAVTLQPAA 150
BSNT_03663___ 140 GAHGEWTGLMMIRAYHEARGDFKRTKVIVPDSAHGTNPASATVAGFETVT 189
|||||||||||||||||||||.||||||||||||||||||||||||||:|
BPUM_2187___g 151 GAHGEWTGLMMIRAYHEARGDDKRTKVIVPDSAHGTNPASATVAGFETIT 200
BSNT_03663___ 190 VKSNENGLVDLEDLKRAVNEETAALMLTNPNTLGLFEEQITEMAEIVHQA 239
|.|:||||||||||:|.|||||||||||||||||||||.|.|||||||.|
BPUM_2187___g 201 VASDENGLVDLEDLRRVVNEETAALMLTNPNTLGLFEENILEMAEIVHGA 250
BSNT_03663___ 240 GGKLYYDGANLNAVLSKARPGDMGFDVVHLNLHKTFTGPHGGGGPGSGPV 289
||||||||||||||||:|||||||||||||||||||||||||||||||||
BPUM_2187___g 251 GGKLYYDGANLNAVLSRARPGDMGFDVVHLNLHKTFTGPHGGGGPGSGPV 300
BSNT_03663___ 290 GVKKDLIPYLPKPVLVKKEGRFTFDYDRPHAIGRVKPYYGNFGINVRAYT 339
||||||||||||||||||||||.||.|||.:||||||:|||||||||||.
BPUM_2187___g 301 GVKKDLIPYLPKPVLVKKEGRFYFDDDRPESIGRVKPFYGNFGINVRAYA 350
BSNT_03663___ 340 YIRSMGPDGLKAVTENAVLNANYMMRKLAPYYDLPFDRHCKHEFVLSGKR 389
||||||||||||||:|||||||||||:|:.::||||||||||||||||||
BPUM_2187___g 351 YIRSMGPDGLKAVTDNAVLNANYMMRRLSTHFDLPFDRHCKHEFVLSGKR 400
BSNT_03663___ 390 QKKLGVRTLDIAKRLLDFGYHPPTIYFPLNVEECIMIEPTETESKETLDA 439
||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_2187___g 401 QKKLGVRTLDIAKRLLDFGYHPPTIYFPLNVEECIMIEPTETESKETLDA 450
BSNT_03663___ 440 FIDAMIQIAKEAEENPELVQEAPHTTIVKRMDETKAARHPVLRYEAVER 488
||:||||||||||||||:||||||||:|||||||||||:|||.:|.
BPUM_2187___g 451 FIEAMIQIAKEAEENPEVVQEAPHTTVVKRMDETKAARNPVLVFER--- 496
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