Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03662 and BPUM_2186

See DNA alignment / Visit BSNT_03662 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:11
# Commandline: needle
#    -asequence pep-align/BSNT_03662___yqhL.1.24716.seq
#    -bsequence pep-align/BPUM_2186___yqhL.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03662___yqhL-BPUM_2186___yqhL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03662___yqhL-BPUM_2186___yqhL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03662___yqhL
# 2: BPUM_2186___yqhL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 128
# Identity:     101/128 (78.9%)
# Similarity:   111/128 (86.7%)
# Gaps:           2/128 ( 1.6%)
# Score: 543.0
# 
#
#=======================================

BSNT_03662___      1 --MSNMIVLIIFAAFIIYMIASYVYQQRIMKTLTEEEFRAGYRKAQLIDV     48
                       |.|.|||.:...|::|.:.||:|||||||||||.||..||||||||||
BPUM_2186___y      1 MSMFNYIVLSLCGLFVLYSVGSYIYQQRIMKTLTEAEFIKGYRKAQLIDV     50

BSNT_03662___     49 REPNEFEGGHILGARNIPLSQLKQRKNEIRTDKPVYLYCQNSVRSGRAAQ     98
                     ||||||:|||||||||||||||||||||||.||||||||||::|||:|||
BPUM_2186___y     51 REPNEFDGGHILGARNIPLSQLKQRKNEIRPDKPVYLYCQNNLRSGKAAQ    100

BSNT_03662___     99 TLRKNGCTEIYNLKGGFKKWGGKIKAKK    126
                     |||||||.||||||||||||||:||.|.
BPUM_2186___y    101 TLRKNGCREIYNLKGGFKKWGGRIKTKN    128


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