Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03656 and BPUM_2183

See DNA alignment / Visit BSNT_03656 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:11
# Commandline: needle
#    -asequence pep-align/BSNT_03656___yqhO.1.24716.seq
#    -bsequence pep-align/BPUM_2183___yqhO.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03656___yqhO-BPUM_2183___yqhO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03656___yqhO-BPUM_2183___yqhO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03656___yqhO
# 2: BPUM_2183___yqhO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 291
# Identity:     190/291 (65.3%)
# Similarity:   249/291 (85.6%)
# Gaps:           0/291 ( 0.0%)
# Score: 1078.0
# 
#
#=======================================

BSNT_03656___      1 MYIDGVFSGGGVKGIALAGAYEVLEEKGFRFKRVAGTSAGAIIAAFIASG     50
                     |.|||||||||:||.|||||||.||.:|::|.|:||||||||||:.||:|
BPUM_2183___y      1 MKIDGVFSGGGIKGAALAGAYEALEARGYQFVRLAGTSAGAIIASLIAAG     50

BSNT_03656___     51 YTSKEIHALIEEVDGEKLLDQRYSFLPLKMLQWVSIYWRLGLYKGDTIEK    100
                     ::|:||..|::|:|...|||:|..|:|.||::|:||||||||||||.:||
BPUM_2183___y     51 FSSQEIRELLDEMDEHHLLDRRCQFIPFKMIRWISIYWRLGLYKGDRLEK    100

BSNT_03656___    101 WIADLLRAKGIRVFGDLQKGSLRLIASDLTNGTMIVLPDDLARYGLNPDM    150
                     |:.|:|:.||:.|||||:|.||:::|||||||.::||||||..|||||:.
BPUM_2183___y    101 WLTDVLKRKGVTVFGDLKKDSLKIVASDLTNGKILVLPDDLPSYGLNPER    150

BSNT_03656___    151 FPVARAVRMSCSIPYFFEPIKLKTDTGTATVVDGGVLSNFPIWLFSKERK    200
                     |.||||:|||||:||||||:|||:..|..|:||||||||||||||::|:|
BPUM_2183___y    151 FSVARAIRMSCSLPYFFEPVKLKSSKGICTIVDGGVLSNFPIWLFAEEKK    200

BSNT_03656___    201 RPVIGVTLAPRERERPKKNIRNAFELFGALFETMKDAHDARHIASRYEQN    250
                     ||.:||||.|.|:|||:.:|||||||||||||||:.|||.||||:::|::
BPUM_2183___y    201 RPFVGVTLTPNEKERPQHSIRNAFELFGALFETMRGAHDERHIATKHERH    250

BSNT_03656___    251 IIFLPVDGVMATDFHLTQQKKLALIELGKRRTELFLKQWTY    291
                     :||:||:.|:||||.|..:||.||::||:::.|.|||.||:
BPUM_2183___y    251 VIFIPVEHVIATDFQLMAEKKKALVDLGRQKAEQFLKSWTF    291


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