Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03654 and BPUM_2181
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:11
# Commandline: needle
# -asequence pep-align/BSNT_03654___yqhQ.1.24716.seq
# -bsequence pep-align/BPUM_2181___yqhQ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03654___yqhQ-BPUM_2181___yqhQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03654___yqhQ-BPUM_2181___yqhQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03654___yqhQ
# 2: BPUM_2181___yqhQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 319
# Identity: 251/319 (78.7%)
# Similarity: 280/319 (87.8%)
# Gaps: 2/319 ( 0.6%)
# Score: 1276.0
#
#
#=======================================
BSNT_03654___ 1 MSKHKVPPAYGGQAVVEGVMFGGKHHYVTAIRRTDGSIDFFKLPRKHNPK 50
||....||||||||||||||||||.:|||||||.|.||:|.||||..|.:
BPUM_2181___y 1 MSNQTKPPAYGGQAVVEGVMFGGKKNYVTAIRRKDQSIEFLKLPRTSNKR 50
BSNT_03654___ 51 LNIVKKIPFLRGIAAIIEASANGTKHLNFSSERYGLDPSEDKTLEQEEKK 100
...:|||||:||:||::||||||:||||||||||.||||||.|||:|: |
BPUM_2181___y 51 TAFLKKIPFVRGVAALVEASANGSKHLNFSSERYDLDPSEDHTLEKEQ-K 99
BSNT_03654___ 101 SSGLSMYLSLAVIGVLSFLFSKFVFTLVPVFLAELTRPIFSSDTAQIAVE 150
||.|||...:|||||||.|||||||||||||||||.||:||.:.||||||
BPUM_2181___y 100 SSKLSMIFGIAVIGVLSLLFSKFVFTLVPVFLAELVRPVFSGNFAQIAVE 149
BSNT_03654___ 151 SLFKLILLLGYIYFLSMTPLIKRVFQYHGAEHKVINCYEQNLPITVENVQ 200
:.|||:||||||||:|||||||||||||||||||||||||||.|||||||
BPUM_2181___y 150 TFFKLVLLLGYIYFISMTPLIKRVFQYHGAEHKVINCYEQNLDITVENVQ 199
BSNT_03654___ 201 NQSRLHYRCGSSFILFTIIVGMFVYLLVPTDPLWLRVIDRVALIPVVLGI 250
.||||||||||||||||:||||||||||||||||:||::|:|||||||||
BPUM_2181___y 200 KQSRLHYRCGSSFILFTVIVGMFVYLLVPTDPLWVRVLNRLALIPVVLGI 249
BSNT_03654___ 251 SFEVLQLTNKVRDIPGLKLLGYPGLWLQLLTTKEPKDEQVEVAIESFNEL 300
||||||||||:|::|.||:||||||||||||||||.|:||||||.|||||
BPUM_2181___y 250 SFEVLQLTNKLREVPVLKVLGYPGLWLQLLTTKEPSDDQVEVAIASFNEL 299
BSNT_03654___ 301 LRLEALS-EQNQKPSHNVI 318
||||..| :|....:|.||
BPUM_2181___y 300 LRLEEASLKQASDSAHQVI 318
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