Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03639 and BPUM_2169

See DNA alignment / Visit BSNT_03639 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:10
# Commandline: needle
#    -asequence pep-align/BSNT_03639___spoIIIAG.1.24716.seq
#    -bsequence pep-align/BPUM_2169___spoIIIAG.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03639___spoIIIAG-BPUM_2169___spoIIIAG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03639___spoIIIAG-BPUM_2169___spoIIIAG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03639___spoIIIAG
# 2: BPUM_2169___spoIIIAG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 230
# Identity:     168/230 (73.0%)
# Similarity:   187/230 (81.3%)
# Gaps:           8/230 ( 3.5%)
# Score: 799.0
# 
#
#=======================================

BSNT_03639___      1 MNKNGLWNVLKKQFLPGQTKDGEKPKLTKYHYFLFVFVLGVSFMLVSQLF     50
                     || |..|....|.||....|...||||||:||.|.||::|||||||||:.
BPUM_2169___s      1 MN-NKDWKQKLKSFLQPPEKGEGKPKLTKHHYLLLVFIIGVSFMLVSQIL     49

BSNT_03639___     51 SSPEKTENAKTITAVSSQHSADSKEKTAEVFKASKSDKPKDSIDDYEKEY    100
                     |.|...|.|    ||.:.....|:|:  ||||.:.|.|.|:||:|.|:||
BPUM_2169___s     50 SPPSSKEQA----AVPASKKTTSQEQ--EVFKPASSSKSKNSIEDVEQEY     93

BSNT_03639___    101 ENQLKEILETIIGVDDVSVVVNVDATSLKVYEKNKSNKNTTTEETDKEGG    150
                     ||||||||||||||:|||:|||||||||||:|||||||:|||||||||||
BPUM_2169___s     94 ENQLKEILETIIGVEDVSIVVNVDATSLKVFEKNKSNKSTTTEETDKEGG    143

BSNT_03639___    151 TRSVTDQTSEEEIVMIKNGDKETPVVVQTKKPDIRGVLVVAQGVDNVQIK    200
                     .|||||||.|||||:||||::|||||||||||||||||||||||||||||
BPUM_2169___s    144 VRSVTDQTKEEEIVIIKNGNEETPVVVQTKKPDIRGVLVVAQGVDNVQIK    193

BSNT_03639___    201 QTIIEAVTRVLDVPSHRVAVAPKKIKEDS-    229
                     :|||||||||||||||||||||||||||| 
BPUM_2169___s    194 KTIIEAVTRVLDVPSHRVAVAPKKIKEDSE    223


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.