Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03638 and BPUM_2168
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:10
# Commandline: needle
# -asequence pep-align/BSNT_03638___spoIIIAH.1.24716.seq
# -bsequence pep-align/BPUM_2168___spoIIIAH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03638___spoIIIAH-BPUM_2168___spoIIIAH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03638___spoIIIAH-BPUM_2168___spoIIIAH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03638___spoIIIAH
# 2: BPUM_2168___spoIIIAH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 227
# Identity: 141/227 (62.1%)
# Similarity: 172/227 (75.8%)
# Gaps: 25/227 (11.0%)
# Score: 669.5
#
#
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BSNT_03638___ 1 -MLKKQTVWLLTMLSLVVVLSVYYIMSPESKNAVQMQSEKSASDSGEVAT 49
|||||||||||||||||||||||||||:.:|||.::..||
BPUM_2168___s 1 MMLKKQTVWLLTMLSLVVVLSVYYIMSPQGENAVTVEEMKS--------- 41
BSNT_03638___ 50 EKAPAKQDTKEKSGTETEKGKEDGT-KGTKDSSADKETSAE------ASE 92
:.|:||. ||.|||.:.|| ||..:.|.||||:.: :.|
BPUM_2168___s 42 ------KGTEEKK-TEPEKGMDKGTEKGADEKSTDKETNGKQEDIETSGE 84
BSNT_03638___ 93 KGTVVTETADDDLFTTYRLDLEDARSKEREELNAIVSSDDATAKEKSEAY 142
:|..|:|..||:|||||||:|||.|||:|||.|.|||||||||:||||||
BPUM_2168___s 85 EGKAVSEQTDDELFTTYRLELEDKRSKQREEFNEIVSSDDATAQEKSEAY 134
BSNT_03638___ 143 DKMTALSEVEGTEKQLETLIKTQGYEDALVNAEGDKINITVKSDKHSKSK 192
|:||||||.||||:||||||||:||:||||:|||||::|||:|||.|||:
BPUM_2168___s 135 DQMTALSEAEGTERQLETLIKTKGYKDALVSAEGDKVSITVRSDKKSKSQ 184
BSNT_03638___ 193 ATAIIDLVAKEIKTMKDVAVTFEPSK- 218
|..|||:|.||::.:.:||||||||.
BPUM_2168___s 185 AADIIDMVTKEMRGLDNVAVTFEPSNE 211
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