Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03600 and BPUM_2151

See DNA alignment / Visit BSNT_03600 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:08
# Commandline: needle
#    -asequence pep-align/BSNT_03600___yqiK.1.24716.seq
#    -bsequence pep-align/BPUM_2151___glpQ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03600___yqiK-BPUM_2151___glpQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03600___yqiK-BPUM_2151___glpQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03600___yqiK
# 2: BPUM_2151___glpQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity:     129/246 (52.4%)
# Similarity:   175/246 (71.1%)
# Gaps:           4/246 ( 1.6%)
# Score: 678.0
# 
#
#=======================================

BSNT_03600___      1 MTKIFAHRGASGQFPENTMLAFEKGIEAGADGIELDVQLTKDGRIVVIHD     50
                     |||||||||..|.:|||||:|||..:.:||||||||||||||||:.||||
BPUM_2151___g      1 MTKIFAHRGFKGIYPENTMIAFEHALHSGADGIELDVQLTKDGRLAVIHD     50

BSNT_03600___     51 ERLNRTTSLKGFVKDTTYDEVKTANAAAGHDQAYSDIKVPLLEDVLSWAV    100
                     |:|||||::.|.|||.||:|:|..:|:....:....:.:||||:||....
BPUM_2151___g     51 EKLNRTTNMTGLVKDHTYEELKAGDASHSFYEETGAVSIPLLEEVLELVT    100

BSNT_03600___    101 KKDFLI-NIELKNSVIRYEGMEEKVLEAVKRFNVEDRVILSTFNHDSLAL    149
                     ::..|| |||||||:.||.|:||||.|.::.|.:||||::|:|:|.||||
BPUM_2151___g    101 QQSSLIMNIELKNSIYRYPGIEEKVKEQIEHFQIEDRVLVSSFHHGSLAL    150

BSNT_03600___    150 CARLAPHIERAVLTSDVLYQADRYIASIPASGYHPKLNSPGVTDEVLKKM    199
                     ..:|.||:|.||||.||::|.:.||.::||.||||.:...|||.||:..:
BPUM_2151___g    151 FHKLMPHVELAVLTMDVIHQPEMYIKTVPARGYHPNIKGAGVTKEVVSAL    200

BSNT_03600___    200 RNGLIKVRPYTVNRPEDMKRLIEAGADGMFTDFPEKASALLKNE--    243
                     ......:||:|||..:.||.:...|.||:|||||::| ..::.|  
BPUM_2151___g    201 HADQQVIRPFTVNSEKQMKSMFSLGVDGIFTDFPDRA-VKIREEMK    245


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