Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03600 and BPUM_2151
See
Amino acid alignment /
Visit
BSNT_03600 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:08
# Commandline: needle
# -asequence dna-align/BSNT_03600___yqiK.1.24716.seq
# -bsequence dna-align/BPUM_2151___glpQ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03600___yqiK-BPUM_2151___glpQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03600___yqiK-BPUM_2151___glpQ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03600___yqiK
# 2: BPUM_2151___glpQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 834
# Identity: 461/834 (55.3%)
# Similarity: 461/834 (55.3%)
# Gaps: 198/834 (23.7%)
# Score: 1116.5
#
#
#=======================================
BSNT_03600___ 1 ATGACAAAGATTTTTGCCCACCGGGG-------GGCATCAGGTCAATTTC 43
|||||.||.||||||||.||..|.|| ||.||| |.||
BPUM_2151___g 1 ATGACGAAAATTTTTGCACATAGAGGTTTTAAAGGAATC-------TATC 43
BSNT_03600___ 44 CCGAAAATACAATGCTTGCATTTGAAAAAGGAATTGAAGCCGGAGCGGAT 93
|.||||||||.|||.|.||.|||||..|.|...||.|..|.|||||.||.
BPUM_2151___g 44 CTGAAAATACGATGATAGCCTTTGAGCACGCGCTTCATTCAGGAGCTGAC 93
BSNT_03600___ 94 GGGATAGAGCTTGATGTACAGCTGACGAAAGACGG-ACGCATTGTTGTGA 142
|||||.|||||.|||||.||||||||||||||.|| |.|| |||.|||.|
BPUM_2151___g 94 GGGATTGAGCTGGATGTCCAGCTGACGAAAGATGGCAGGC-TTGCTGTCA 142
BSNT_03600___ 143 TTCATGATGA-AAGACTTAATCGCACGAC----ATCACTTAAAGGATTCG 187
||||.||||| ||| ||.||..|.||.|| ||.|| |||.||.|
BPUM_2151___g 143 TTCACGATGAGAAG-CTGAACAGAACAACGAATATGAC----AGGCTTAG 187
BSNT_03600___ 188 TGAAGG---ATACAACCTATGATGAGGTAAAGACTGCGA-ATGCGGCCGC 233
||||.| ||||| |||||.|||.||||..|.| || |||||
BPUM_2151___g 188 TGAAAGACCATACA---TATGAAGAGTTAAAAGCAG-GAGATGCG----- 228
BSNT_03600___ 234 TGGTCA------CGATCAAGCGTACAGCGATATAAAAGTGCCGCTGCTAG 277
.|||| ..||.||| ||| |||.|||| |
BPUM_2151___g 229 -AGTCATTCTTTTTATGAAG--------------AAA---CCGGTGCT-G 259
BSNT_03600___ 278 AA--GATGTGCTCTCGTGGGCGGTAAAAAAGGATT----TTC-------- 313
.| .|| |.||||..||| |..|||.||| .||
BPUM_2151___g 260 TATCCAT-TCCTCTTTTGG------AGGAAGTATTGGAGCTCGTGACCCA 302
BSNT_03600___ 314 ----TCATC----------AACATTGAATTAAAAAACAGCGTGATC---- 345
||||| ||.||||||.|.|||||| ||
BPUM_2151___g 303 GCAATCATCACTCATTATGAATATTGAACTGAAAAAC-------TCCATT 345
BSNT_03600___ 346 ---CGCTATGAGGGAATGGAAGAAAAAGTGCTGGAGGC--AGTGAAGCGA 390
||.|||...||.||.|||||.||.||...||| || |.||||....
BPUM_2151___g 346 TATCGATATCCAGGTATTGAAGAGAAGGTAAAGGA-GCAAATTGAACACT 394
BSNT_03600___ 391 TTCAATGTAGAGGACAGAGTCATCCTATCCACCTTTAATCATGACAGCTT 440
||||| .||||.||..|.||..|..|.||..|.|||.||||.|.|||.||
BPUM_2151___g 395 TTCAA-ATAGAAGATCGTGTACTTGTCTCATCGTTTCATCACGGCAGTTT 443
BSNT_03600___ 441 GGCGCTATGCGCCCGGCTTGCGCCGCATATCGAACGGGCAGTATTAACTT 490
.||.||.|....|..|||...|||||||.|.||.|..||.||..|.||..
BPUM_2151___g 444 AGCTCTTTTTCACAAGCTAATGCCGCATGTTGAGCTTGCTGTTCTCACAA 493
BSNT_03600___ 491 CAGATGTGCTTTATCAGGCAGATCGATATATCGCGTCTA-------TTCC 533
..||||||.||.|||||.|||| |||.|| |.|| |.||
BPUM_2151___g 494 TGGATGTGATTCATCAGCCAGA--GATGTA-----TATAAAAACAGTACC 536
BSNT_03600___ 534 GGCTTCCGGCTATCACCCGAAGCTAAACAGCCCAGGGGTCACAGATGAAG 583
.||....||.|||||||||||..||||..|..|||||||.|||.|.||||
BPUM_2151___g 537 TGCAAGAGGGTATCACCCGAATATAAAGGGTGCAGGGGTAACAAAAGAAG 586
BSNT_03600___ 584 ----------------TACTGA--AGAAAATGAGGAACGGTTTGATTAAG 615
|.|||| ||.||.|.|
BPUM_2151___g 587 TCGTATCGGCTCTCCATGCTGACCAGCAAGTCA----------------- 619
BSNT_03600___ 616 GTAAGGCCGTATACAGTCAATCGTCCGGAA---GATATGAAGCGTCTCAT 662
|.|||||.|.|||||||||..|| ||| .|.|||||
BPUM_2151___g 620 -TTAGGCCATTTACAGTCAACAGT---GAAAAGCAAATGAA--------- 656
BSNT_03600___ 663 TGAAGC-----------GGGAGCAGACGGCATGTTTACCGACTTTCCAGA 701
|||| .||.|..|||||.||.||.||.||.|||||.||
BPUM_2151___g 657 --AAGCATGTTTTCCTTAGGTGTCGACGGAATCTTCACAGATTTTCCTGA 704
BSNT_03600___ 702 -AAAGGCTTCGGCATTGCTGAA-AAATG-AATAG 732
|.||.|.||...||....||| ||||| ||||.
BPUM_2151___g 705 TAGAGCCGTCAAAATAAGAGAAGAAATGAAATAA 738
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.