Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03588 and BPUM_2149
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:07
# Commandline: needle
# -asequence pep-align/BSNT_03588___bkdR.1.24716.seq
# -bsequence pep-align/BPUM_2149___rocR.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03588___bkdR-BPUM_2149___rocR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03588___bkdR-BPUM_2149___rocR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03588___bkdR
# 2: BPUM_2149___rocR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 692
# Identity: 516/692 (74.6%)
# Similarity: 601/692 (86.8%)
# Gaps: 2/692 ( 0.3%)
# Score: 2646.5
#
#
#=======================================
BSNT_03588___ 1 MQKVLIVGAGKRGTALLHILIKTAIIDIIAVVDKDPEAPGLKEAEQYGIA 50
||:|||||||:.|:|||..|:||.:|.|:|:.|.|..|||:.||::.||.
BPUM_2149___r 1 MQRVLIVGAGQGGSALLETLLKTNMIQIVAIADLDLGAPGMVEAKKNGID 50
BSNT_03588___ 51 VSSDWKPYIQQKPDIVIHTTGDQAVFDELLQRKHEDTIVMPGKMAYIVFQ 100
.::|||.||:...||:|.|||..||..||::.|.|.::::|..|||::.:
BPUM_2149___r 51 TTTDWKEYIKDDIDIIIETTGSSAVLKELMEEKTEQSVIVPSSMAYVISE 100
BSNT_03588___ 101 LMEEKQHLIQMLKEQTYKYDRIFNSTHDGMIFIDINEEIILFNHMAEKMV 150
||.||..|||:|||||||:|||||:|:||||||:::||::|||..|.|||
BPUM_2149___r 101 LMSEKHQLIQILKEQTYKHDRIFNATNDGMIFINMDEEVVLFNRSAAKMV 150
BSNT_03588___ 151 GKKREEVIGRPIKEVIPSTKMPRILKTRVPEYNQKQLLGDHLQIVTTRLP 200
|:.:::.|||.|:||||:||:|.||::|.||::|||.|...:||||||||
BPUM_2149___r 151 GRSQKDAIGRHIREVIPNTKLPDILRSREPEFHQKQFLNQQIQIVTTRLP 200
BSNT_03588___ 201 IIDEGGRLLGALCVFKDITDAVELAEEVTNLKQVRTMLEAIIQSSDEAIS 250
|||:.||:||||.:||||||||||||||||||:|||||||||||||||||
BPUM_2149___r 201 IIDDAGRMLGALSIFKDITDAVELAEEVTNLKEVRTMLEAIIQSSDEAIS 250
BSNT_03588___ 251 VVDENGIGLLINKAYTKMTGLSEKEVIGKPANTDISEGESMHLKVLETRR 300
||||.|.|:|||:||||||||::|||:||||..|||||||||||||||||
BPUM_2149___r 251 VVDEQGKGILINRAYTKMTGLTDKEVVGKPAGADISEGESMHLKVLETRR 300
BSNT_03588___ 301 PVRGVRMKVGPNEKEVIVNVAPVIVDGILKGSVGVIHDVSEIKMLTAELN 350
||||||||||||:|:|||||||||||||||||||||||||||:.||.|||
BPUM_2149___r 301 PVRGVRMKVGPNKKDVIVNVAPVIVDGILKGSVGVIHDVSEIQSLTNELN 350
BSNT_03588___ 351 RARQIIRTLEAKYTFDDIIGKSEQMLVALEQAKLGAKTPATILLRGESGT 400
:|||:||||||||||:||||:|||||||||||||||||||||||||||||
BPUM_2149___r 351 KARQLIRTLEAKYTFEDIIGESEQMLVALEQAKLGAKTPATILLRGESGT 400
BSNT_03588___ 401 GKELFAHAIHNESDRKYNKFIRVNCAALSENLLESELFGYEDGAFSGAKR 450
||||||||||||||||||:|:|||||||||.||||||||||:||||||:|
BPUM_2149___r 401 GKELFAHAIHNESDRKYNRFVRVNCAALSETLLESELFGYEEGAFSGARR 450
BSNT_03588___ 451 GGKKGLFEEANNGSIFLDEIGELTQNMQAKLLRVLQEKEIVRVGGTKAIP 500
|||||||||||:||||||||||:|.:.|||||||:|||||||||||||||
BPUM_2149___r 451 GGKKGLFEEANHGSIFLDEIGEMTPSTQAKLLRVMQEKEIVRVGGTKAIP 500
BSNT_03588___ 501 VNVRVIAATNVNIEKAMADGTFREDLYYRINRYPISIPPLRQRLEDIEAL 550
|:||||.|||||||||||:|.||||||||:|||||||||||||||||::|
BPUM_2149___r 501 VDVRVITATNVNIEKAMAEGKFREDLYYRMNRYPISIPPLRQRLEDIDSL 550
BSNT_03588___ 551 SVRLIQKINRDYGRNVKGLSQQALRALSAYHWPGNVRELENVLGRAMIFL 600
|.|||||||.||||||.||::.||..|.:|.|||||||||||||||||||
BPUM_2149___r 551 SKRLIQKINLDYGRNVSGLTEGALDRLRSYSWPGNVRELENVLGRAMIFL 600
BSNT_03588___ 601 NPHMEWIEKDHLPVFELEQKENDTDQGTGFNFPDIEGEKLSVAVEKFEAH 650
||..|||::||:...|.|::|....|....: ..|||.||.|||.|||.
BPUM_2149___r 601 NPQEEWIDEDHISFMESEEQEEKEQQELAVS--QFEGETLSDAVEAFEAQ 648
BSNT_03588___ 651 LIQQTLEKHHFNRTKTAKALGVSIRNLYYKMDKYGLANEGMQ 692
||:||||||.||||||||.||:||||||||||||.||.:.||
BPUM_2149___r 649 LIKQTLEKHQFNRTKTAKTLGISIRNLYYKMDKYQLAKDSMQ 690
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