Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03580 and BPUM_2144

See DNA alignment / Visit BSNT_03580 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:06
# Commandline: needle
#    -asequence pep-align/BSNT_03580___bkdAA.1.24716.seq
#    -bsequence pep-align/BPUM_2144___bfmBAA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03580___bkdAA-BPUM_2144___bfmBAA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03580___bkdAA-BPUM_2144___bfmBAA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03580___bkdAA
# 2: BPUM_2144___bfmBAA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 330
# Identity:     274/330 (83.0%)
# Similarity:   298/330 (90.3%)
# Gaps:           0/330 ( 0.0%)
# Score: 1433.0
# 
#
#=======================================

BSNT_03580___      1 MSTNRHQALGLTDQEAVDMYRTMLLARKIDERMWLLNRSGKIPFVISCQG     50
                     ||..||..|||:|::|:|:|||||||||||||||||||||||||||||||
BPUM_2144___b      1 MSNMRHHELGLSDEQAIDIYRTMLLARKIDERMWLLNRSGKIPFVISCQG     50

BSNT_03580___     51 QEAAQVGAAFALDREMDYVLPYYRDMGVVLAFGMTAKDLMMSGFAKAADP    100
                     |||.||||||||:||.||||||||||||||||||||||||||||||..||
BPUM_2144___b     51 QEAQQVGAAFALNREEDYVLPYYRDMGVVLAFGMTAKDLMMSGFAKQDDP    100

BSNT_03580___    101 NSGGRQMPGHFGQKKNRIVTGSSPVTTQVPHAVGIALAGRMEKKDIAAFV    150
                     ||||||||||||||.|||||||||||||||||||||||||:::|:..:||
BPUM_2144___b    101 NSGGRQMPGHFGQKSNRIVTGSSPVTTQVPHAVGIALAGRLDQKNFVSFV    150

BSNT_03580___    151 TFGEGSSNQGDFHEGANFAAVHKLPVIFMCENNKYAISVPYDKQVACENI    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BPUM_2144___b    151 TFGEGSSNQGDFHEGANFAAVHKLPVIFMCENNKYAISVPYDKQVACERI    200

BSNT_03580___    201 SDRAVGYGMPGVTVNGNDPLEVYQAVKEARERARRGEGPTLIETISYRLT    250
                     ||||:|||||||||:||||||||.||||||:||.||||||||||||||||
BPUM_2144___b    201 SDRAIGYGMPGVTVDGNDPLEVYAAVKEARDRAARGEGPTLIETISYRLT    250

BSNT_03580___    251 PHSSDDDDSSYRGREEVEEAKKSDPLLTYQAYLKETGLLSDEMEQTMLDE    300
                     .|||||||||||.:|||.||:|.|||:.|:.||.|..:::.||::.|..|
BPUM_2144___b    251 AHSSDDDDSSYREKEEVLEARKKDPLIKYETYLTEGNVMTSEMKEEMTKE    300

BSNT_03580___    301 IMAIVNEATDEAENAPYAAPESALDYVYAK    330
                     ||.||||||||||||.||..||||.||||:
BPUM_2144___b    301 IMQIVNEATDEAENAAYADAESALRYVYAE    330


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