Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03578 and BPUM_2142
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:06
# Commandline: needle
# -asequence pep-align/BSNT_03578___bkdB.1.24716.seq
# -bsequence pep-align/BPUM_2142___bfmBB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03578___bkdB-BPUM_2142___bfmBB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03578___bkdB-BPUM_2142___bfmBB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03578___bkdB
# 2: BPUM_2142___bfmBB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 430
# Identity: 316/430 (73.5%)
# Similarity: 354/430 (82.3%)
# Gaps: 18/430 ( 4.2%)
# Score: 1554.0
#
#
#=======================================
BSNT_03578___ 1 MAIEQMTMPQLGESVTEGTISKWLVAPGDKVNKYDPIAEVMTDKVNAEVP 50
||.|||.||||||||||||||||||:|||.||||||||||||||||||||
BPUM_2142___b 1 MATEQMKMPQLGESVTEGTISKWLVSPGDHVNKYDPIAEVMTDKVNAEVP 50
BSNT_03578___ 51 SSFTGTITELVGEEGQTLQVGEVICKIETEGANPAEQKQEQPAASKAAET 100
||||||||:|..|||.|||||||.|:||.||: ::|..|:.||.:.:|.
BPUM_2142___b 51 SSFTGTITKLSAEEGDTLQVGEVFCEIEVEGS--SQQSAEEEAAPEQSEA 98
BSNT_03578___ 101 PAAKSAEAADQPNKKRYSPAVLRLAGEHGIDLDQVTGTGAGGRITRKDIQ 150
|.|...: .||..||||||||||||.||.|||..|.||||||||||||:.
BPUM_2142___b 99 PEADQTK-EDQSQKKRYSPAVLRLADEHSIDLAAVQGTGAGGRITRKDLL 147
BSNT_03578___ 151 RLIETGGVQEQKAEEPKTAAPAPKSASKPEPKEETSYPASA------AGD 194
:|||:||:||: .||..:.|.|||| .::|.|.:| .||
BPUM_2142___b 148 QLIESGGMQEK-------VAPVNEQAIKPEP-VQSSKPKAAPSISTMPGD 189
BSNT_03578___ 195 KEIPVTGVRKAIASNMKRSKTEIPHAWTMMEVDVTNMVAYRNSIKDSFKK 244
.|:|||.:|:|||:||.|||.|||||||||||||||:|..||.:||.||.
BPUM_2142___b 190 NELPVTPIRQAIAANMLRSKHEIPHAWTMMEVDVTNLVTRRNQLKDQFKA 239
BSNT_03578___ 245 TEGFNLTFFAFFVKAVAQALKEFPQMNSMWAGDKIIQKKDINISIAVATE 294
.|||||||||||||||||:|||||:||||||||||:|||.||:||||||:
BPUM_2142___b 240 KEGFNLTFFAFFVKAVAQSLKEFPEMNSMWAGDKIVQKKAINVSIAVATD 289
BSNT_03578___ 295 DSLFVPVIKNADEKTIKGIAKDITGLAKKVRDGKLTADDMQGGTFTVNNT 344
|:|||||||:|||||||||||:|..||.|||.|.|...||:|||||||||
BPUM_2142___b 290 DALFVPVIKDADEKTIKGIAKEIHELASKVRQGTLKQSDMEGGTFTVNNT 339
BSNT_03578___ 345 GSFGSVQSMGIINYPQAAILQVESIVKRPVVMDNGMIAVRDMVNLCLSLD 394
||||||||||||||||||||||||||||||:: |||||.|||||||||||
BPUM_2142___b 340 GSFGSVQSMGIINYPQAAILQVESIVKRPVIV-NGMIAARDMVNLCLSLD 388
BSNT_03578___ 395 HRVLDGLVCGRFLGRVKQILESIDEKTSVY 424
|||||||||||||.|:|||||.|||:||||
BPUM_2142___b 389 HRVLDGLVCGRFLQRIKQILEGIDEQTSVY 418
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