Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03578 and BPUM_2142

See DNA alignment / Visit BSNT_03578 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:06
# Commandline: needle
#    -asequence pep-align/BSNT_03578___bkdB.1.24716.seq
#    -bsequence pep-align/BPUM_2142___bfmBB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03578___bkdB-BPUM_2142___bfmBB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03578___bkdB-BPUM_2142___bfmBB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03578___bkdB
# 2: BPUM_2142___bfmBB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 430
# Identity:     316/430 (73.5%)
# Similarity:   354/430 (82.3%)
# Gaps:          18/430 ( 4.2%)
# Score: 1554.0
# 
#
#=======================================

BSNT_03578___      1 MAIEQMTMPQLGESVTEGTISKWLVAPGDKVNKYDPIAEVMTDKVNAEVP     50
                     ||.|||.||||||||||||||||||:|||.||||||||||||||||||||
BPUM_2142___b      1 MATEQMKMPQLGESVTEGTISKWLVSPGDHVNKYDPIAEVMTDKVNAEVP     50

BSNT_03578___     51 SSFTGTITELVGEEGQTLQVGEVICKIETEGANPAEQKQEQPAASKAAET    100
                     ||||||||:|..|||.|||||||.|:||.||:  ::|..|:.||.:.:|.
BPUM_2142___b     51 SSFTGTITKLSAEEGDTLQVGEVFCEIEVEGS--SQQSAEEEAAPEQSEA     98

BSNT_03578___    101 PAAKSAEAADQPNKKRYSPAVLRLAGEHGIDLDQVTGTGAGGRITRKDIQ    150
                     |.|...: .||..||||||||||||.||.|||..|.||||||||||||:.
BPUM_2142___b     99 PEADQTK-EDQSQKKRYSPAVLRLADEHSIDLAAVQGTGAGGRITRKDLL    147

BSNT_03578___    151 RLIETGGVQEQKAEEPKTAAPAPKSASKPEPKEETSYPASA------AGD    194
                     :|||:||:||:       .||..:.|.|||| .::|.|.:|      .||
BPUM_2142___b    148 QLIESGGMQEK-------VAPVNEQAIKPEP-VQSSKPKAAPSISTMPGD    189

BSNT_03578___    195 KEIPVTGVRKAIASNMKRSKTEIPHAWTMMEVDVTNMVAYRNSIKDSFKK    244
                     .|:|||.:|:|||:||.|||.|||||||||||||||:|..||.:||.||.
BPUM_2142___b    190 NELPVTPIRQAIAANMLRSKHEIPHAWTMMEVDVTNLVTRRNQLKDQFKA    239

BSNT_03578___    245 TEGFNLTFFAFFVKAVAQALKEFPQMNSMWAGDKIIQKKDINISIAVATE    294
                     .|||||||||||||||||:|||||:||||||||||:|||.||:||||||:
BPUM_2142___b    240 KEGFNLTFFAFFVKAVAQSLKEFPEMNSMWAGDKIVQKKAINVSIAVATD    289

BSNT_03578___    295 DSLFVPVIKNADEKTIKGIAKDITGLAKKVRDGKLTADDMQGGTFTVNNT    344
                     |:|||||||:|||||||||||:|..||.|||.|.|...||:|||||||||
BPUM_2142___b    290 DALFVPVIKDADEKTIKGIAKEIHELASKVRQGTLKQSDMEGGTFTVNNT    339

BSNT_03578___    345 GSFGSVQSMGIINYPQAAILQVESIVKRPVVMDNGMIAVRDMVNLCLSLD    394
                     ||||||||||||||||||||||||||||||:: |||||.|||||||||||
BPUM_2142___b    340 GSFGSVQSMGIINYPQAAILQVESIVKRPVIV-NGMIAARDMVNLCLSLD    388

BSNT_03578___    395 HRVLDGLVCGRFLGRVKQILESIDEKTSVY    424
                     |||||||||||||.|:|||||.|||:||||
BPUM_2142___b    389 HRVLDGLVCGRFLQRIKQILEGIDEQTSVY    418


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