Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03573 and BPUM_2140

See DNA alignment / Visit BSNT_03573 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:06
# Commandline: needle
#    -asequence pep-align/BSNT_03573___bmrU.1.24716.seq
#    -bsequence pep-align/BPUM_2140___bmrU.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03573___bmrU-BPUM_2140___bmrU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03573___bmrU-BPUM_2140___bmrU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03573___bmrU
# 2: BPUM_2140___bmrU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 298
# Identity:     165/298 (55.4%)
# Similarity:   224/298 (75.2%)
# Gaps:           2/298 ( 0.7%)
# Score: 901.0
# 
#
#=======================================

BSNT_03573___      1 -MSHRKALLIHNGNAGNKNIEKALGAVVPVLSHHLDEVIIKQTKKKDDAY     49
                      ...:||:||:|||||.||:||.||..||:||.|:||:|:|.||:.:|||
BPUM_2140___b      1 MAQFKKAMLIYNGNAGQKNMEKVLGQTVPLLSLHIDELILKPTKQPNDAY     50

BSNT_03573___     50 HFCRSIDDSVDTVFILGGDGTIHQCINAISALERKPAVGILPGGTCNDFS     99
                     .|||:||::::.:.|||||||:|:|:|.|..||.:|||.|||||||||||
BPUM_2140___b     51 QFCRTIDETIELLIILGGDGTVHECMNGIGGLEERPAVAILPGGTCNDFS    100

BSNT_03573___    100 RVLGIPQNLAKAAEALMAGNKTSVDVCQMNDRYFLNFWGIGLIAETSNQI    149
                     |.|||||.:.|||:.::.|.:..||:.:..|||.||||||||||:|||.|
BPUM_2140___b    101 RTLGIPQQIQKAAQMIIDGVEKKVDLIKAEDRYLLNFWGIGLIADTSNNI    150

BSNT_03573___    150 NETEKALLGKISYFTSALRTVSSAASFPMTLKIDGKEIKEEAVMLLVMNG    199
                     |:.|||:|||||||||||||:.....|.:.::.:.:..:||||::|||||
BPUM_2140___b    151 NDKEKAVLGKISYFTSALRTLQQTEPFHVRVETEEESWEEEAVIVLVMNG    200

BSNT_03573___    200 QYIGTNRIPLPDASIEDGLLDVLICRNTNLTALRELMSMEQGSIDRFTGE    249
                     .:||||:|.||.|:|:||..::||||||:.:||:|:.||.:..::.|||:
BPUM_2140___b    201 HFIGTNKIDLPSAAIDDGKAEILICRNTSFSALKEIFSMNREELEDFTGD    250

BSNT_03573___    250 LSYVQASRIEIETDTAKKADMDGEVYTHTPAVIQVLPQHIDMLVPANG    297
                     ||.:|||.|:|.|.....||.|||||...||.::||.||:..:||.. 
BPUM_2140___b    251 LSLIQASSIQIHTKEEMDADTDGEVYMTAPASLEVLKQHLTFIVPTE-    297


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