Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03562 and BPUM_2134

See DNA alignment / Visit BSNT_03562 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:05
# Commandline: needle
#    -asequence pep-align/BSNT_03562___yqjB.1.24716.seq
#    -bsequence pep-align/BPUM_2134.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03562___yqjB-BPUM_2134.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03562___yqjB-BPUM_2134.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03562___yqjB
# 2: BPUM_2134
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 177
# Identity:     102/177 (57.6%)
# Similarity:   134/177 (75.7%)
# Gaps:           9/177 ( 5.1%)
# Score: 573.0
# 
#
#=======================================

BSNT_03562___      1 MR-FFLCSIFMMISPIWPLGENPLPGDPYVIVNKRTNELAVILDNRVEGV     49
                     || .|...:.|.:|||||||:||||||||||:||:|||||.|...:::.:
BPUM_2134          1 MRLLFYTVLTMSLSPIWPLGQNPLPGDPYVIINKQTNELAYIDQGQIQKI     50

BSNT_03562___     50 YSVATGKTDDLTPEGEFSVTVKAENPYYRKKNIEGGSPDNPLGARWIGFD     99
                     |..:||||.||||||||::.:||::|||||||||||:.:||||.||||||
BPUM_2134         51 YPASTGKTTDLTPEGEFTIMIKAKDPYYRKKNIEGGAKNNPLGRRWIGFD    100

BSNT_03562___    100 AKGTDGRIYGIHGTNREESVGKFVSNGCIRMHNDEVVHLFQTIPVGTRVL    149
                     |:|||||.||||||:.|.|:|||::.||:|:||.:|..||..:||||:|.
BPUM_2134        101 ARGTDGRTYGIHGTSDETSIGKFITAGCVRLHNQDVELLFDQLPVGTKVW    150

BSNT_03562___    150 ITDDNRSFEEIAIEHKALIKKQDIPIE    176
                     ||....|||::|.:.:|:.        
BPUM_2134        151 ITTSTDSFEKLAKDKQAIR--------    169


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