Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03561 and BPUM_2132

See DNA alignment / Visit BSNT_03561 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:05
# Commandline: needle
#    -asequence pep-align/BSNT_03561___yqjC.1.24716.seq
#    -bsequence pep-align/BPUM_2132___yqjC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03561___yqjC-BPUM_2132___yqjC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03561___yqjC-BPUM_2132___yqjC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03561___yqjC
# 2: BPUM_2132___yqjC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 142
# Identity:      60/142 (42.3%)
# Similarity:    86/142 (60.6%)
# Gaps:           4/142 ( 2.8%)
# Score: 281.0
# 
#
#=======================================

BSNT_03561___      1 MNRLDHIGIAVFSIKDARSFYENVLGLAFLHQETVEEQKVNVAFFQAGSV     50
                     ||::|||.|||||||:.....:.:....|...:.:.||::..:|.....|
BPUM_2132___y      1 MNQIDHIAIAVFSIKNTSCILQQLFNWHFSDVQEIPEQEIKASFASLDHV     50

BSNT_03561___     51 KLELIEPLTADSPVRLFLEKKGQGLHHIAFLCNGLSEQLQALSDRHVQLI    100
                     .:|||||::..|.:..||.|:|:||||||.....:...|..|....|:|:
BPUM_2132___y     51 HIELIEPMSVSSKLHTFLTKRGEGLHHIALKSGDIQADLNHLDHLGVELL    100

BSNT_03561___    101 DRFPRQGANGKKIAFISPRETNGVLVELCEP-KGDQQ-NEHE    140
                     .:..:.||.||:||||||:||:|||.||||. ||::. ||  
BPUM_2132___y    101 QQSAQIGACGKQIAFISPKETSGVLFELCEHLKGEEHGNE--    140


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