Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03558 and BPUM_2131
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:05
# Commandline: needle
# -asequence pep-align/BSNT_03558.1.24716.seq
# -bsequence pep-align/BPUM_2131___yqjD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03558-BPUM_2131___yqjD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03558-BPUM_2131___yqjD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03558
# 2: BPUM_2131___yqjD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 507
# Identity: 219/507 (43.2%)
# Similarity: 274/507 (54.0%)
# Gaps: 151/507 (29.8%)
# Score: 1108.0
#
#
#=======================================
BSNT_03558 0 -------------------------------------------------- 0
BPUM_2131___y 1 MAMNESFNDLAKWREKAFMGGGEKRAAAHRNKGKLSVRERLHELLDGGSF 50
BSNT_03558 0 -------------------------------------------------- 0
BPUM_2131___y 51 MEIQAFATGCMSEHVGDGVVTGTGLIHGRPVCVYAQDATVHGGSLGEIHA 100
BSNT_03558 1 -------------------------------MVSLDGYGHIFYRNVLYSG 19
:|||:|||.||.|||||||
BPUM_2131___y 101 KKIVSLMDLAAKNQIPIIGLKDSGGARIQEGVVSLEGYGQIFKRNVLYSG 150
BSNT_03558 20 VIPQISVILGPCAGGAVYSPALTDFIFMAEQTGRMFITGPKVIEKVTGEQ 69
.|||||||||.||||||||||||||:||.|||..||:||||||||.|||.
BPUM_2131___y 151 QIPQISVILGSCAGGAVYSPALTDFVFMTEQTAHMFLTGPKVIEKATGET 200
BSNT_03558 70 VDAESLGGAGIHNAVSGNAHFSGHTEKEVLTGVRKLLSYLPLNGRT-TEP 118
|..:.||||.:.:..|||.|::|..||:||..||.||:|:|...:| |:.
BPUM_2131___y 201 VCPDRLGGASVQHQTSGNVHYTGKDEKDVLKAVRTLLTYIPTKQQTVTDA 250
BSNT_03558 119 KPEK-EASRPLLNRLVPADTTKPYDVRKVIRELADPQTFFELQPFFAKNI 167
:..| :|..| ..::|.:.::.|||::|:..:.|..:|||.||.|:|||
BPUM_2131___y 251 ETSKRDADDP--GNILPKNPSRTYDVKQVVTAIIDSDSFFETQPCFSKNI 298
BSNT_03558 168 VIGFARLGEKAIGIVASQPKHLAGSLTIDAADKAARFIRFCDAFDIPLLT 217
|.|||||...:||:||:|||.|||||.:||||||||||||||||.||:||
BPUM_2131___y 299 VTGFARLQGASIGVVANQPKVLAGSLDLDAADKAARFIRFCDAFHIPILT 348
BSNT_03558 218 VEDVPGFLPGIQQEHNGIIRHGAKLLFAYAEATVPKVTLIIRKAYGGAYV 267
:.||||||||.:.||.||||||||||:|||||||||:|:|:|||:|||||
BPUM_2131___y 349 LVDVPGFLPGEKAEHAGIIRHGAKLLYAYAEATVPKITVILRKAFGGAYV 398
BSNT_03558 268 AMNSKAIGADLVFAWPNAEIAVMGPEGAASILYEKEIKASADPQKTKREK 317
|||||.:|||.|:|||.|||.|||...|..|::....:...:|
BPUM_2131___y 399 AMNSKGLGADFVYAWPAAEIDVMGKTFADEIVHPASREVETEP------- 441
BSNT_03558 318 TAEYKKQNAGPYKAAACGMVDDIILPEESRGKLIQAFHMLAHKTEERPKK 367
...|||..|::|||.:|.|:|.:||::|.:|..|.|:||.|
BPUM_2131___y 442 ---------SVLKAAQAGLIDDIFMPSETRERLIRSFDLLRRKEEDRPLK 482
BSNT_03558 368 KHGNIPL 374
||||:||
BPUM_2131___y 483 KHGNMPL 489
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