Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03553 and BPUM_2128
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:05
# Commandline: needle
# -asequence pep-align/BSNT_03553___yqjG.1.24716.seq
# -bsequence pep-align/BPUM_2128___oxaA2.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03553___yqjG-BPUM_2128___oxaA2.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03553___yqjG-BPUM_2128___oxaA2.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03553___yqjG
# 2: BPUM_2128___oxaA2
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 279
# Identity: 158/279 (56.6%)
# Similarity: 204/279 (73.1%)
# Gaps: 11/279 ( 3.9%)
# Score: 824.0
#
#
#=======================================
BSNT_03553___ 1 MLKTYQKLLAMGIFLIVLCSGNAAFAATNQVGGLSNVGFFHDYLIEPFSA 50
.::||.:...|.::...:.||||:.|....|: ||||.|.::|||.
BPUM_2128___o 1 ----MKRLLTICTTLCLMMIASPAFAASGQTNASSD-GFFHHYFVQPFSE 45
BSNT_03553___ 51 LLKGVAGLFHGEYGLSIILVTIIVRIVVLPLFVNQFKKQRIFQEKMAVIK 100
|:..:|..||.:|||||:.||:|||:::.|||.|||||||:.|||||::|
BPUM_2128___o 46 LIIWLANFFHDDYGLSIMFVTLIVRLLIFPLFANQFKKQRVMQEKMALVK 95
BSNT_03553___ 101 PQVDSIQVKLKKTKDPEKQKELQMEMMKLYQENNINPLAMGCLPMLIQSP 150
||:|.||.||||||:|||||||||||||:|:|||:|||||||||||||.|
BPUM_2128___o 96 PQIDDIQSKLKKTKEPEKQKELQMEMMKVYKENNVNPLAMGCLPMLIQIP 145
BSNT_03553___ 151 IMIGLYYAIRSTPEIASHSFLWFSLGQSDILMSLSAGIMYFVQAYIAQKL 200
|::|.|.|||||||||:||||||:|||:|:|:::.||.|||:|.|:.|:.
BPUM_2128___o 146 IVLGFYSAIRSTPEIATHSFLWFNLGQTDLLVAIFAGAMYFLQFYVTQRF 195
BSNT_03553___ 201 SAKYSAVPQNPAAQQSAKLMVFIFPVMMTIFSLNVPAALPLYWFTSGLFL 250
||.|.. |..||.:.||:|..|||:||...|:|.||||||||.||||.|
BPUM_2128___o 196 -AKQSGT-QTEAALKQAKVMGMIFPIMMLFISINAPAALPLYWMTSGLLL 243
BSNT_03553___ 251 TVQNIVLQMTHHKSKKTAALTESVK---- 275
|||.|:|.:.:.|||..|...:...
BPUM_2128___o 244 TVQTIILNVMYQKSKSKAETNDQASPAAE 272
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