Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03552 and BPUM_2127

See DNA alignment / Visit BSNT_03552 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:05
# Commandline: needle
#    -asequence pep-align/BSNT_03552___yqzJ.1.24716.seq
#    -bsequence pep-align/BPUM_2127___yqzJ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03552___yqzJ-BPUM_2127___yqzJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03552___yqzJ-BPUM_2127___yqzJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03552___yqzJ
# 2: BPUM_2127___yqzJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 102
# Identity:      54/102 (52.9%)
# Similarity:    65/102 (63.7%)
# Gaps:          13/102 (12.7%)
# Score: 255.0
# 
#
#=======================================

BSNT_03552___      1 MDVMTMFVESINDVLFLVDFFTIILPALTAIGIAFLLRECRVGEQWKSKR     50
                          |.:::.|:|.|||:||||||||||||||||||::||:.|.....|
BPUM_2127___y      1 -----MIIDTFNEVFFLVEFFTIILPALTAIGIAFLLKDCRMNEHLGGHR     45

BSNT_03552___     51 TDEHQTVFHINRTDFLIIIYHRITTWIRKVFRMNSPVNDEEDAGSLLL--     98
                     .:|..... :||||||.|||.||||||.||.||....||:||.   ||  
BPUM_2127___y     46 LEELDASL-LNRTDFLFIIYDRITTWISKVIRMKRSSNDDEDH---LLPL     91

BSNT_03552___     98 --     98
                       
BPUM_2127___y     92 SN     93


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