Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03551 and BPUM_2125

See DNA alignment / Visit BSNT_03551 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:05
# Commandline: needle
#    -asequence pep-align/BSNT_03551___yqjH.1.24716.seq
#    -bsequence pep-align/BPUM_2125___polY1.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03551___yqjH-BPUM_2125___polY1.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03551___yqjH-BPUM_2125___polY1.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03551___yqjH
# 2: BPUM_2125___polY1
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 415
# Identity:     293/415 (70.6%)
# Similarity:   350/415 (84.3%)
# Gaps:           2/415 ( 0.5%)
# Score: 1549.0
# 
#
#=======================================

BSNT_03551___      1 MPGKSRIIFHIDMNSFYASVEMAYDPALRGKPVAVAGNVKERKGIVVTCS     50
                     || .|.||||||||:|||:|||||||:|||||:|::||.|||||||||||
BPUM_2125___p      1 MP-MSNIIFHIDMNAFYANVEMAYDPSLRGKPLAISGNAKERKGIVVTCS     49

BSNT_03551___     51 YEARARGVKTTMPVWQAKRHCPELIVLPPNFDRYRNSSRAMFTILREYTD    100
                     |||||.|||..||:|:|||.||.|||..|||||||:||:.||||||||:|
BPUM_2125___p     50 YEARALGVKPPMPLWEAKRLCPGLIVRTPNFDRYRSSSQEMFTILREYSD     99

BSNT_03551___    101 LVEPVSIDEGYMDMTDTPYNSRALETAKEIQSRLQKELLLPSSIGIAPNK    150
                     |||||||||||:|:|.|||...|::||.:||:||.:||:|||||||||||
BPUM_2125___p    100 LVEPVSIDEGYIDLTHTPYAEHAVKTAHDIQTRLVEELMLPSSIGIAPNK    149

BSNT_03551___    151 FLAKMASDMKKPLGITILRKRQVPDILWPLPVGEMHGVGKKTAEKLKGLG    200
                     |||||||:.|||:||||||||.||.:|||||.|:|||||:|||:|||.:|
BPUM_2125___p    150 FLAKMASNWKKPMGITILRKRDVPQMLWPLPAGDMHGVGQKTADKLKTIG    199

BSNT_03551___    201 IHTIGELAAADEHSLKRLLGINGPRLKNKANGIHHAPVDPERIYEFKSVG    250
                     ||||.:||.|:|::||.||||||||||.||||.|...|||||||||||||
BPUM_2125___p    200 IHTIEDLAKANEYTLKELLGINGPRLKQKANGEHDGIVDPERIYEFKSVG    249

BSNT_03551___    251 NSSTLSHDSSDEEELLGVFRKLAASVSARLQRKEVMASKLFIMIRYADWK    300
                     |||||.|||.|.:||:.:..||:.||||||:||||||::|.||||||.||
BPUM_2125___p    250 NSSTLPHDSDDPDELVALIDKLSQSVSARLRRKEVMANRLLIMIRYASWK    299

BSNT_03551___    301 TITRSTTLRNPIDQKNDILKEAEHLFFKHWNKNPVRLLGITGTDLVEKEQ    350
                     .||||.||.||.|:|.|:.:.|..||.||||..||||||:|||||||::.
BPUM_2125___p    300 NITRSVTLTNPTDRKEDLYEAARQLFLKHWNDQPVRLLGVTGTDLVERKA    349

BSNT_03551___    351 AYKQLDLFSFNEDAKDEPIQQMMEKLNKKYGTKLIRKGATLKKEESKTKG    400
                     |.|||||||:.||||:||:|.::|.|.:|||..|:::|.|:|::||||.|
BPUM_2125___p    350 AVKQLDLFSYTEDAKEEPLQTILEGLKEKYGKSLVQRGMTIKEKESKTSG    399

BSNT_03551___    401 TSFNKDFFHDEKKS-    414
                     ||||||||.||:.: 
BPUM_2125___p    400 TSFNKDFFQDERGND    414


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