Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01001 and BPUM_2121

See DNA alignment / Visit BSNT_01001 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:39
# Commandline: needle
#    -asequence pep-align/BSNT_01001.1.24716.seq
#    -bsequence pep-align/BPUM_2121___ydhM.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01001-BPUM_2121___ydhM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01001-BPUM_2121___ydhM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01001
# 2: BPUM_2121___ydhM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 103
# Identity:      67/103 (65.0%)
# Similarity:    79/103 (76.7%)
# Gaps:          11/103 (10.7%)
# Score: 341.0
# 
#
#=======================================

BSNT_01001         1 -----------MSTSLLVTKMKEYAQSIGEEAEIWAVGQDKAKEDMRKAD     39
                                |||||||||||.:|.|||:||:|||||||:|:::|..||
BPUM_2121___y      1 MKRILLACSSGMSTSLLVTKMKAHADSIGDEADIWAVGQDQARKEMANAD     50

BSNT_01001        40 AVLIGPQMSFLKSELQKEADQYNIRVEVIDMMAYGMADGKKAYEQALSLM     89
                     .|||||||||||.:|||||.:|.|.||||||.|||:|||:||||||:|||
BPUM_2121___y     51 VVLIGPQMSFLKGDLQKEATKYGIAVEVIDMQAYGLADGQKAYEQAVSLM    100

BSNT_01001        90 VNQ     92
                     ...
BPUM_2121___y    101 EES    103


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