Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01002 and BPUM_2120

See DNA alignment / Visit BSNT_01002 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:39
# Commandline: needle
#    -asequence pep-align/BSNT_01002.1.24716.seq
#    -bsequence pep-align/BPUM_2120___ydhN.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01002-BPUM_2120___ydhN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01002-BPUM_2120___ydhN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01002
# 2: BPUM_2120___ydhN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 110
# Identity:      41/110 (37.3%)
# Similarity:    58/110 (52.7%)
# Gaps:          39/110 (35.5%)
# Score: 222.0
# 
#
#=======================================

BSNT_01002         1 MEQMKITNLTDEQISFQLILHSGNARSCIIQSLRAYKEGNKDEADALIAK     50
                     ||:..:..||:||:|||||||||||||.::|||:.::||.:|||..|:.:
BPUM_2120___y      1 MEKKTLEGLTEEQVSFQLILHSGNARSKLLQSLKQFREGQEDEAFGLMKE     50

BSNT_01002        51 AEQDLSAAHDIHFQMIQKESG-----------------------------     71
                     ||:||..||.||||::|:|:|                             
BPUM_2120___y     51 AEEDLRHAHGIHFQLVQQEAGGEKTPFSLLLMHAEDHLMSTMTIKELVGE    100

BSNT_01002        71 ----------     71
                               
BPUM_2120___y    101 LLPIFQSLKQ    110


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