Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01003 and BPUM_2119
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:39
# Commandline: needle
# -asequence pep-align/BSNT_01003.1.24716.seq
# -bsequence pep-align/BPUM_2119___ydhO.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01003-BPUM_2119___ydhO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01003-BPUM_2119___ydhO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01003
# 2: BPUM_2119___ydhO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 448
# Identity: 207/448 (46.2%)
# Similarity: 224/448 (50.0%)
# Gaps: 188/448 (42.0%)
# Score: 1044.0
#
#
#=======================================
BSNT_01003 1 MFEKISQFLVPIAGRLNNNRYLQVLRDAFMLAFPLTIFGSIFVVLTNLPF 50
||:|||..||||||||||||||.||||||||||||||||||.|||.||||
BPUM_2119___y 1 MFDKISAILVPIAGRLNNNRYLGVLRDAFMLAFPLTIFGSIMVVLMNLPF 50
BSNT_01003 51 LNKIMNASMLTSFQSHFGIASTATMGIMSVFVVFGIGYYLSKSYQVEAVF 100
|:|||:.:.|...||...||.:||:.||||||||||||||||||.|||||
BPUM_2119___y 51 LDKIMSQTALEGVQSALNIAPSATISIMSVFVVFGIGYYLSKSYDVEAVF 100
BSNT_01003 101 GGAIALVSFLLLTPFIVQPETGDAVTGVIPVDRLGAKGMFLGMITAFLSG 150
||.|||.||||||||:::.|.|.::.|||||||||||||||||||.|||.
BPUM_2119___y 101 GGVIALASFLLLTPFLLEQEGGASIAGVIPVDRLGAKGMFLGMITGFLSA 150
BSNT_01003 151 EIYRRIVQKNLTIKMPAGVPPAVAKSFAALIPAFITLTVFLLINVMVTLF 200
||||..|||...|.||.||||||:|||||||||.:|||.|||||:::|..
BPUM_2119___y 151 EIYRYFVQKKFVINMPQGVPPAVSKSFAALIPATLTLTTFLLINIIITQG 200
BSNT_01003 201 FKTNMHDVIYHAIQAPLVGLGSGIIPTLIAVFFIQILWFFGLHGQIIINS 250
|||||||:||||||||||||||||||||||||||||||||||||||||||
BPUM_2119___y 201 FKTNMHDLIYHAIQAPLVGLGSGIIPTLIAVFFIQILWFFGLHGQIIINS 250
BSNT_01003 251 VMDPIWNTLQ---------------------------------------- 260
|||||||||.
BPUM_2119___y 251 VMDPIWNTLSIQNLESYTKTGEVPNIISKQFIEIYTVGMGGTGMTLAVVF 300
BSNT_01003 260 -------------------------------------------------- 260
BPUM_2119___y 301 TILIFLKSKQLKQVAKLGLGPGLFNVNEPIIFGLPIVMNPLILIPWILAP 350
BSNT_01003 260 -------------------------------------------------- 260
BPUM_2119___y 351 MVITCISYFAMASGIVPPPTGVNIPWTVPIFISGIMATNSLAGGLLQLFN 400
BSNT_01003 260 ------------------------------------------------ 260
BPUM_2119___y 401 LMIVFVIWFPFLKFIDRMNVKNEKITTTEKTKTTNIKGEGDSIHVDGK 448
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