Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01007 and BPUM_2118
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:40
# Commandline: needle
# -asequence pep-align/BSNT_01007___ydhP.1.24716.seq
# -bsequence pep-align/BPUM_2118___ydhP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01007___ydhP-BPUM_2118___ydhP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01007___ydhP-BPUM_2118___ydhP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01007___ydhP
# 2: BPUM_2118___ydhP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 468
# Identity: 341/468 (72.9%)
# Similarity: 414/468 (88.5%)
# Gaps: 3/468 ( 0.6%)
# Score: 1959.0
#
#
#=======================================
BSNT_01007___ 1 --MAQTEQ-YRFPKDFWWGSSASATQTEGAADRDGKGQNIWDYWFEKEPH 47
|...:| |.||:.||||||||||||||:...||||.||||:|||:||.
BPUM_2118___y 1 MSMENNKQSYTFPEGFWWGSSASATQTEGSVPGDGKGPNIWDHWFEQEPT 50
BSNT_01007___ 48 RFFDHVGPADTSQFYDNYKEDIRLMKELGHNSFRMSISWSRLIPNGTGEI 97
||||.|||..|||||..||||||||||:||||||:|||||||:|.|||.:
BPUM_2118___y 51 RFFDGVGPNVTSQFYRKYKEDIRLMKEIGHNSFRLSISWSRLLPEGTGAV 100
BSNT_01007___ 98 NDKAANFYNNVIDELIANGIEPFVNLFHFDMPIALQKIGGWVNRETVDAY 147
|::|.:|||:||:||||:.|||||||:|||||:|||:.||||||:.||.|
BPUM_2118___y 101 NEEAVSFYNDVINELIAHDIEPFVNLYHFDMPMALQEKGGWVNRQVVDDY 150
BSNT_01007___ 148 ENYARTCFRLFGGRVKKWFTHNEPIVPVEGGYLYDFHYPNKVDFKEAVQV 197
.:||..||:|||.|||||||||||||||||||:|.|||||:|||::||||
BPUM_2118___y 151 VSYAELCFQLFGDRVKKWFTHNEPIVPVEGGYMYSFHYPNEVDFQKAVQV 200
BSNT_01007___ 198 GFHTMLSSARAIQAYREMKQDGKIGIILNLTPSYPRSSHPADVKAGEIAD 247
|:|.:||:|:||.||:::|||||||||||||||||||.:|.||:|.|:||
BPUM_2118___y 201 GYHELLSNAKAIAAYKKLKQDGKIGIILNLTPSYPRSQNPRDVEAAEMAD 250
BSNT_01007___ 248 AFFNRSFLDPSVKGEFPKELVDILKHEGFMPDYNAEDLDIIKKNTVDLLG 297
||||||||||:|||.||::||::||.|||||.....||::|::|||||||
BPUM_2118___y 251 AFFNRSFLDPAVKGHFPEKLVEVLKKEGFMPSMQEGDLELIQENTVDLLG 300
BSNT_01007___ 298 VNYYQPRRVKAKEHLPNPDAPFLPDRYFDPYVMPGRKMNPHRGWEIYEKG 347
:|||||||||||||:|:|:|||:|:.|||.:.|||||||.:|||||||||
BPUM_2118___y 301 INYYQPRRVKAKEHMPHPNAPFMPNHYFDAFDMPGRKMNVYRGWEIYEKG 350
BSNT_01007___ 348 VYDILINLKENYGNIECFISENGMGVEGEERFRDEQGIIQDDYRIEFIKE 397
:||||..::.:|.|||||||||||||||||||:||:|:|.|||||:||.|
BPUM_2118___y 351 IYDILKKVQTDYDNIECFISENGMGVEGEERFKDEEGMIHDDYRIDFIAE 400
BSNT_01007___ 398 HLKWIHRAIQEGSNVKGYHLWTFMDNWSWTNAYKNRYGFVSVNLEKDGER 447
||||:|:||:|||||||||||||||||||:||||||||||||:|::||:|
BPUM_2118___y 401 HLKWVHQAIKEGSNVKGYHLWTFMDNWSWSNAYKNRYGFVSVDLQEDGKR 450
BSNT_01007___ 448 TVKKSGKWFKKVAEHSGF 465
|:||||.||:.|:|::||
BPUM_2118___y 451 TIKKSGYWFQSVSENNGF 468
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