Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03549 and BPUM_2116
See
DNA alignment /
Visit
BSNT_03549 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:04
# Commandline: needle
# -asequence pep-align/BSNT_03549___zwf.1.24716.seq
# -bsequence pep-align/BPUM_2116___zwf.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03549___zwf-BPUM_2116___zwf.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03549___zwf-BPUM_2116___zwf.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03549___zwf
# 2: BPUM_2116___zwf
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 492
# Identity: 400/492 (81.3%)
# Similarity: 441/492 (89.6%)
# Gaps: 4/492 ( 0.8%)
# Score: 2122.0
#
#
#=======================================
BSNT_03549___ 1 --MKTNQQPKAVIVIFGATGDLAKRKLYPSIHRLYQNGQIGEEFAVVGVG 48
.:|| .|||||||||||||||||||||||||||.:|::|::|||||||
BPUM_2116___z 1 MNTETN-NPKAVIVIFGATGDLAKRKLYPSIHRLYHSGKLGDQFAVVGVG 49
BSNT_03549___ 49 RRPWSNEDLRQTVKTSISS-SADKHIDDFTSHFYYHPFDVTNPGSYQELN 97
|||||:||||..||.|:|| .|:..|::|:||||||.|||:||.|||.||
BPUM_2116___z 50 RRPWSHEDLRAVVKESVSSDDAEAKIEEFSSHFYYHDFDVSNPASYQSLN 99
BSNT_03549___ 98 VLLNQLEDTYQIPNNRMFYLAMAPEFFGTIAKTLKSEGVTATTGWSRLVI 147
.||..|||||.|||||||||||||||||||||.||||||:.|||||||||
BPUM_2116___z 100 TLLAGLEDTYSIPNNRMFYLAMAPEFFGTIAKFLKSEGVSKTTGWSRLVI 149
BSNT_03549___ 148 EKPFGHDLPSAQALNKEIREAFTEDQIYRIDHYLGKQMVQNIEVIRFANA 197
|||||||||||:.||:|||:||:|||||||||||||||||||||||||||
BPUM_2116___z 150 EKPFGHDLPSAKKLNEEIRDAFSEDQIYRIDHYLGKQMVQNIEVIRFANA 199
BSNT_03549___ 198 IFEPLWTNRYISNIQITSSESLGVEDRARYYEKSGALRDMVQNHIMQMVA 247
||||||||||||||||||||||||||||||||.|||||||||||::||||
BPUM_2116___z 200 IFEPLWTNRYISNIQITSSESLGVEDRARYYESSGALRDMVQNHMLQMVA 249
BSNT_03549___ 248 LLAMEPPIKLNTEEIRSEKVKVLRALRPIAKDEVDEYFVRGQYQAGEIDG 297
|||||||||||||||||||.|.||||||.:|||||::||||||.||.:||
BPUM_2116___z 250 LLAMEPPIKLNTEEIRSEKRKALRALRPFSKDEVDQFFVRGQYDAGTVDG 299
BSNT_03549___ 298 VPVPAYTDEDNVAPDSNTETFVAGKLLIDNFRWAGVPFYIRTGKRMKEKS 347
..||:|.:|.||.|:||||||||||||||||||||||||||||||:::||
BPUM_2116___z 300 GMVPSYLEEQNVDPNSNTETFVAGKLLIDNFRWAGVPFYIRTGKRLEKKS 349
BSNT_03549___ 348 TKIVVQFKDIPMNLYYGNENNMNPNLLVIHIQPDEGITLYLNAKKLGGAA 397
|:||||||||||||||||.|:|:||||||||||||||||:|||:||.|..
BPUM_2116___z 350 TQIVVQFKDIPMNLYYGNGNSMHPNLLVIHIQPDEGITLHLNARKLDGGT 399
BSNT_03549___ 398 HAQPIKLDYCSNCNDELNTPEAYEKLIHDCLLGDATNFAHWDEVALSWSF 447
.|:||||||.:|.||.:|||||||||||||||||||||||||||||||:|
BPUM_2116___z 400 FAKPIKLDYQTNYNDIMNTPEAYEKLIHDCLLGDATNFAHWDEVALSWNF 449
BSNT_03549___ 448 VDSISETWAANKTLSPNYESGSMGPKVSDDLLAKDGLHWWNI 489
||.|||.||.||||.|||.:||||||.:|.||.|||.|||||
BPUM_2116___z 450 VDPISEKWAENKTLKPNYPAGSMGPKEADQLLEKDGYHWWNI 491
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.