Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03547 and BPUM_2115

See DNA alignment / Visit BSNT_03547 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:04
# Commandline: needle
#    -asequence pep-align/BSNT_03547___rnz.1.24716.seq
#    -bsequence pep-align/BPUM_2115___rnz.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03547___rnz-BPUM_2115___rnz.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03547___rnz-BPUM_2115___rnz.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03547___rnz
# 2: BPUM_2115___rnz
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     228/309 (73.8%)
# Similarity:   263/309 (85.1%)
# Gaps:           2/309 ( 0.6%)
# Score: 1195.0
# 
#
#=======================================

BSNT_03547___      1 MELLFLGTGAGIPAKARNVTSVALKLLEERRSVWLFDCGEATQHQILHTT     50
                     |||||||||||||||.||||..||||||||::||||||||||||||||||
BPUM_2115___r      1 MELLFLGTGAGIPAKTRNVTCTALKLLEERKAVWLFDCGEATQHQILHTT     50

BSNT_03547___     51 IKPRKIEKIFITHMHGDHVYGLPGLLGSRSFQGGEDELTVYGPKGIKAFI    100
                     ||||||:||||||||||||||||||||||||||||||||:|||||||||:
BPUM_2115___r     51 IKPRKIDKIFITHMHGDHVYGLPGLLGSRSFQGGEDELTIYGPKGIKAFV    100

BSNT_03547___    101 ETSLAVTKTHLTYPLAIQEIEEGIVFEDDQFIVTAVSVIHGVEAFGYRVQ    150
                     ..:|:.|:|||||||.|.||:||:|||||.|.|.|..|.||:.|:||||.
BPUM_2115___r    101 NATLSATQTHLTYPLHIIEIDEGVVFEDDTFQVEARRVSHGIPAYGYRVV    150

BSNT_03547___    151 EKDVPGSLKADVLKEMNIPPGPVYQKIKKGETVTLEDGRIINGNDFLEPP    200
                     ||||||:|||:.|||:.:.|||:|||:|.|:||||||||||:|.|:||||
BPUM_2115___r    151 EKDVPGALKAEDLKEIGVKPGPLYQKLKNGDTVTLEDGRIIDGTDYLEPP    200

BSNT_03547___    201 KKGRSVVFSGDTRVSDKLKELARDCDVLVHEATFAKEDRKLAYDYYHSTT    250
                     ||||.|.||||||:.:.:..||:|.|||||||||.|||..|||:||||||
BPUM_2115___r    201 KKGRIVAFSGDTRLCENITRLAKDADVLVHEATFGKEDADLAYNYYHSTT    250

BSNT_03547___    251 EQAAVTAKEARAKQLILTHISARYQGDASL-ELQKEAVDVFPNSVAAYDF    299
                     ||||.||:||.||:||||||||||||:.:| :|.|||.|:||.:.||.||
BPUM_2115___r    251 EQAAKTAQEAGAKRLILTHISARYQGEEALNQLLKEARDIFPLTEAAQDF    300

BSNT_03547___    300 LEVNVPRG-    307
                     ...::.|. 
BPUM_2115___r    301 SSFSIDRTL    309


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