Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03545 and BPUM_2113

See DNA alignment / Visit BSNT_03545 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:04
# Commandline: needle
#    -asequence pep-align/BSNT_03545___yqjL.1.24716.seq
#    -bsequence pep-align/BPUM_2113___yqjL.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03545___yqjL-BPUM_2113___yqjL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03545___yqjL-BPUM_2113___yqjL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03545___yqjL
# 2: BPUM_2113___yqjL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity:     125/255 (49.0%)
# Similarity:   165/255 (64.7%)
# Gaps:           3/255 ( 1.2%)
# Score: 642.5
# 
#
#=======================================

BSNT_03545___      1 MKSAWMEKTYTIDGCAFHTQHRKGSSGVTIVFEAGYGTSSETWKPLMADI     50
                     |.||.:|:.|.|||..|:|:||:|....||:||||||.|..||..:..||
BPUM_2113___y      1 MNSAMIERMYHIDGHHFYTKHRQGKRQATIIFEAGYGISGNTWSNMARDI     50

BSNT_03545___     51 DDEFGIFTYDRAGIGKSGQSRAKRTADQQVKELESLLKAADVKPPYLAVS    100
                     |.|.|:|.|||.|.|||..|...||......:|::||:.|:::||:|.|:
BPUM_2113___y     51 DPELGVFLYDRLGNGKSSDSSEGRTLHDLADDLDALLEEANIQPPFLIVA    100

BSNT_03545___    101 HSYGAVITGLWACKNKYDIIGMVLLDPALGDCAS--FTFIPEEMHRSHTR    148
                     ||:|::::.|||.:...|:|||||||||..:...  ...:.:|...|:..
BPUM_2113___y    101 HSFGSLVSRLWASRRGDDVIGMVLLDPASEEQEQVILPLLSKEERTSYMA    150

BSNT_03545___    149 KMMLEGTHAEFSKSLQELKKRQVHLGNMPLLVLSSGERTEKFAAEQEWQN    198
                     :...|.||.:|.:.|..:|:.|.|.|.|||||:|||:......|.:.|..
BPUM_2113___y    151 QFTAECTHEDFQQMLSTMKEEQTHYGMMPLLVISSGKNRLFHPAHEAWLR    200

BSNT_03545___    199 LHSSILSLSNQSGWIQAKNSSHNIHHDEPHIVHLAIYDVWCAACQQAAPL    248
                     ||..:||||:|||||||:||||.|||||||||.|||||||||| :|....
BPUM_2113___y    201 LHKRMLSLSSQSGWIQAQNSSHYIHHDEPHIVQLAIYDVWCAA-KQPVSY    249

BSNT_03545___    249 YQAVN    253
                     ||..|
BPUM_2113___y    250 YQTAN    254


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