Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03539 and BPUM_2109

See DNA alignment / Visit BSNT_03539 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:04
# Commandline: needle
#    -asequence pep-align/BSNT_03539___proI.1.24716.seq
#    -bsequence pep-align/BPUM_2109___proI.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03539___proI-BPUM_2109___proI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03539___proI-BPUM_2109___proI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03539___proI
# 2: BPUM_2109___proI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 278
# Identity:     145/278 (52.2%)
# Similarity:   200/278 (71.9%)
# Gaps:           3/278 ( 1.1%)
# Score: 751.0
# 
#
#=======================================

BSNT_03539___      1 MKKIGFVGAGSMAEAMINGILQSGITKPEHIYITNRSNDERLIELKETYG     50
                     |.||||:|||||||:||.|:|:|||...|.:.:||::|::||.|||..||
BPUM_2109___p      1 MSKIGFIGAGSMAESMIKGLLKSGIMSNEDMIVTNKTNEKRLEELKVRYG     50

BSNT_03539___     51 VRPCRDKNEFFTHTDIIILAFKPKDAAESIDSIRPYIKDQLVISVLAGLT    100
                     |:....::..:...||::.|.|||||...|..:||:::.||:||:|||::
BPUM_2109___p     51 VKTDFSRSFIYEEADILVFALKPKDAESGISEVRPHLQGQLIISILAGIS    100

BSNT_03539___    101 IETIQHYFGRKLAVIRVMPNTSAAIRKSATGFSVSTEASKNDIIAAKALL    150
                     |||||||.|.|.||:|.||||||||::|||..:||.|.:::....|..|.
BPUM_2109___p    101 IETIQHYAGEKTAVVRAMPNTSAAIQQSATAIAVSQEVTEDQKKKAIELF    150

BSNT_03539___    151 ETIGDATLVEERHLDAVTAIAGSGPAYVYRYIEAMEKAAQKVGLDKETAK    200
                     ||||..|:::|..|:|||||||||||::|..||.||:.|.::|:|:.|||
BPUM_2109___p    151 ETIGHVTVLDESQLNAVTAIAGSGPAFIYHLIEGMERGASELGMDQATAK    200

BSNT_03539___    201 ALILQTMAGATDMLLQSGKQPEKLRKEITSPGGTTEAGLRALQDSRFEEA    250
                     .||.|.:|||.:||..|||:|.:|||||||.||||||||..|...:||||
BPUM_2109___p    201 LLICQMIAGAANMLQSSGKEPAELRKEITSEGGTTEAGLNTLASYQFEEA    250

BSNT_03539___    251 IIHCIEETAKRSAEIKEQFAGAALERHS    278
                     ::.|::...||:||:.|.|:....:   
BPUM_2109___p    251 VVDCVKTATKRAAELNEMFSANTYK---    275


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