Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03537 and BPUM_2108

See DNA alignment / Visit BSNT_03537 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:04
# Commandline: needle
#    -asequence pep-align/BSNT_03537___yqjP.1.24716.seq
#    -bsequence pep-align/BPUM_2108___yqjP.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03537___yqjP-BPUM_2108___yqjP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03537___yqjP-BPUM_2108___yqjP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03537___yqjP
# 2: BPUM_2108___yqjP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 319
# Identity:     147/319 (46.1%)
# Similarity:   202/319 (63.3%)
# Gaps:           3/319 ( 0.9%)
# Score: 759.0
# 
#
#=======================================

BSNT_03537___      1 MTTEDVIAIRVPTPFAVGDVIVYLVKGDALTLIDAGPNTKEAARALQEQL     50
                      ..||:|.:.:|||||||||..|::||:|:||:|.||.|:||..|...||
BPUM_2108___y      1 -MKEDIIQLSIPTPFAVGDVHAYILKGEAVTLVDCGPMTEEAEHAFVTQL     49

BSNT_03537___     51 AAVNVKLSDIEQVVLTHHHADHAGLLDVFSDEIEVIGHAFNEPYISRNQA    100
                     ....:.:.||:|||||||||||.|||::....:.||||..||||||::..
BPUM_2108___y     50 HEHRLSIDDIDQVVLTHHHADHVGLLNLMKPHVRVIGHQLNEPYISQDPL     99

BSNT_03537___    101 FMDWQKRFFQKLLPELGVPFDTGKAEKLMRSAYAFSCTRSLTKSIREGMG    150
                     |.:.|..|.:.|..:||||....:.|::::.:|.:|||..:...|:||..
BPUM_2108___y    100 FKERQITFTKHLFQQLGVPLRPDECERIVKQSYTYSCTAHVDDVIKEGDR    149

BSNT_03537___    151 IDGLEGWSVLEMPGHAESHIVLFHEKSGRMLGGDLLLANSSSNPILEAPK    200
                     :.|.|.:.|:|.||||:||:....|.:|..:||||||...||||::|||.
BPUM_2108___y    150 LKGHEQFYVIETPGHAQSHLSFLDETTGHFIGGDLLLTTISSNPLMEAPY    199

BSNT_03537___    201 AGDVRSKPLVDYQRSLRRLSQLDPTIVFPGHGEPITSVQALIEKRFDKQR    250
                     .|:.|.|.|:.|:.||.||..|....::||||:.|||...|||:||.||.
BPUM_2108___y    200 EGEERQKSLLQYKASLNRLLHLPIKTIYPGHGQLITSHHELIEERFKKQE    249

BSNT_03537___    251 NRTEDVRRMLDEKPMTAFQVCQQLFPAVYEKELFLTMSETAGHLDVLEAE    300
                     .|...:.::|..|.||||.:|::|||.:||:.||||||||.|.||||...
BPUM_2108___y    250 KRANTMYQLLKRKEMTAFHLCRKLFPVLYEEALFLTMSETVGQLDVLLEA    299

BSNT_03537___    301 EAITSYWEGNTAYFKTMKR    319
                     ..|....:....|:|..  
BPUM_2108___y    300 GQIEEVQKDGILYYKAN--    316


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