Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03536 and BPUM_2107

See DNA alignment / Visit BSNT_03536 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:04
# Commandline: needle
#    -asequence pep-align/BSNT_03536___yqjQ.1.24716.seq
#    -bsequence pep-align/BPUM_2107___yqjQ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03536___yqjQ-BPUM_2107___yqjQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03536___yqjQ-BPUM_2107___yqjQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03536___yqjQ
# 2: BPUM_2107___yqjQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 259
# Identity:     164/259 (63.3%)
# Similarity:   207/259 (79.9%)
# Gaps:           1/259 ( 0.4%)
# Score: 854.0
# 
#
#=======================================

BSNT_03536___      1 MKHIAGKRIWITGASGGLGERIAYLCAAEGAHVLLSARREDRLIEIKRKI     50
                     |..:.||||||||||||:||::|||.|.|||.:::||||.::|..:|.||
BPUM_2107___y      1 MGRLTGKRIWITGASGGIGEKMAYLAAEEGAEIIISARRIEKLTGVKEKI     50

BSNT_03536___     51 TEEWSGQCEIFPLDVGRLEDIARVRDQIGSVDVLINNAGFGIFETVLDST    100
                     |.. .|.|.|..|||..||||.|..:::|:||:|:||||||.|:.|.|::
BPUM_2107___y     51 TSA-GGVCRIVELDVSHLEDIDRAYEEVGAVDILVNNAGFGAFDLVEDAS     99

BSNT_03536___    101 LDDMKAMFDVNVFGLIACTKAVLPQMLEQKKGHIINIASQAGKIATPKSS    150
                     :::|.:||:|||||||||||.|:|:|.::..||||||||||||||||||:
BPUM_2107___y    100 IEEMVSMFEVNVFGLIACTKKVIPEMKQRGHGHIINIASQAGKIATPKSA    149

BSNT_03536___    151 LYSATKHAVLGYSNALRMELSGTGIYVTTVNPGPIQTDFFSIADKGGDYA    200
                     :|||:||||||:||:||||||..||:|||||||||.||||:|||:.|:|.
BPUM_2107___y    150 IYSASKHAVLGFSNSLRMELSDIGIHVTTVNPGPIATDFFTIADRSGEYV    199

BSNT_03536___    201 KNVGRWMLDPDDVAAQITAAIFTKKREINLPRLMNAGTKLYQLFPALVEK    250
                     |||...||..|.||.::.:|:.|||||||||..||||:|||||||.|.||
BPUM_2107___y    200 KNVEFMMLSADKVAGKVVSAMMTKKREINLPGWMNAGSKLYQLFPFLFEK    249

BSNT_03536___    251 LAGRAFMKK    259
                     .|.:|.|||
BPUM_2107___y    250 AARKAMMKK    258


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