Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03533 and BPUM_2105

See DNA alignment / Visit BSNT_03533 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:03
# Commandline: needle
#    -asequence pep-align/BSNT_03533___coaA.1.24716.seq
#    -bsequence pep-align/BPUM_2105___coaA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03533___coaA-BPUM_2105___coaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03533___coaA-BPUM_2105___coaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03533___coaA
# 2: BPUM_2105___coaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 319
# Identity:     210/319 (65.8%)
# Similarity:   258/319 (80.9%)
# Gaps:          26/319 ( 8.2%)
# Score: 1130.0
# 
#
#=======================================

BSNT_03533___      1 MKNKELNLHTLYTQHNRASWSGFGGHLSIAVSEEEAKAVEGLNDYLSVEE     50
                                               :.::||||||:|::|||||||:||
BPUM_2105___c      1 --------------------------MPVSVSEEEARALQGLNDYLSLEE     24

BSNT_03533___     51 VETIYIPLVRLLHLHVKSAAERNKHVNVFLKHPHSAKIPFIIGIAGSVAV    100
                     |:.|||||:|.|.|||.:..::|:|||.||.:||.|||||:|||||||||
BPUM_2105___c     25 VQDIYIPLIRFLTLHVFAEKQKNQHVNAFLNYPHHAKIPFLIGIAGSVAV     74

BSNT_03533___    101 GKSTTARILQKLLSRLPDRPKVSLITTDGFLFPTAELKKKNMMSRKGFPE    150
                     ||||||||::.|||||.|..||||:||||||:|..|||.:.:|.:|||||
BPUM_2105___c     75 GKSTTARIIETLLSRLGDGLKVSLVTTDGFLYPQKELKDRGLMEKKGFPE    124

BSNT_03533___    151 SYDVKALLEFLNDLKSGKDSVKAPVYSHLTYDREEGVFEVVEQADIVIIE    200
                     ||||||||.|||:|||||.:|.|||||||||||.|||:|.||.|||||||
BPUM_2105___c    125 SYDVKALLSFLNELKSGKQTVHAPVYSHLTYDRLEGVYETVEDADIVIIE    174

BSNT_03533___    201 GINVLQSPTLEDDRENPRIFVSDFFDFSIYVDAEESRIFTWYLERFRLLR    250
                     ||||||||.|:|.::.||:||||||||||||||.|::|.:||.|||||||
BPUM_2105___c    175 GINVLQSPALDDLKDEPRVFVSDFFDFSIYVDAAETQIQSWYKERFRLLR    224

BSNT_03533___    251 ETAFQNPDSYFHKFKDLSDQEADEMAASIWESVNRPNLYENILPTKFRSD    300
                     |||||:|:|:||::|||:|:|||.||::||.:|||||||:||||||:|:|
BPUM_2105___c    225 ETAFQDPESFFHQYKDLTDEEADHMASTIWNTVNRPNLYQNILPTKYRAD    274

BSNT_03533___    301 LILRKGDGHKVEEVLVRRV    319
                     |||:|||.|||||:.:|||
BPUM_2105___c    275 LILKKGDRHKVEEIAIRRV    293


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