Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03530 and BPUM_2104
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:03
# Commandline: needle
# -asequence pep-align/BSNT_03530___yqjV.1.24716.seq
# -bsequence pep-align/BPUM_2104.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03530___yqjV-BPUM_2104.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03530___yqjV-BPUM_2104.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03530___yqjV
# 2: BPUM_2104
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 420
# Identity: 244/420 (58.1%)
# Similarity: 318/420 (75.7%)
# Gaps: 19/420 ( 4.5%)
# Score: 1294.0
#
#
#=======================================
BSNT_03530___ 1 MK-KWKDIHPISWTIIIGTIFGRMATSMSIPFLAIYLTAVQGASASYAGL 49
|| ..:.:||:|||||||||||||||||||||||:|||.|:|||||.|||
BPUM_2104 1 MKNNLRTLHPLSWTIIIGTIFGRMATSMSIPFLAVYLTQVKGASASSAGL 50
BSNT_03530___ 50 VIAASSSVGILASFYGGYISDKFGRKNMMLVSIFGWMLVFAGFAAASHLW 99
:||.||.:||:||||||||||:.|||.:||:|||||.|||.|||.|..:|
BPUM_2104 51 IIAVSSLIGIVASFYGGYISDRIGRKKVMLLSIFGWTLVFVGFAFADAIW 100
BSNT_03530___ 100 VFFVVNALNGLCKSLFEPASKALLSDMTEEKTRLLVFNLRYAAINIGVVF 149
|||::|||||||::||||.|||||||:|....||.||||||.||||||:|
BPUM_2104 101 VFFIMNALNGLCRALFEPTSKALLSDVTPSSIRLFVFNLRYTAINIGVIF 150
BSNT_03530___ 150 GPVLGLYFGSSQSTTPFLVPAVIYGLYGIVLALQFKKHPSLSAPAQSRNM 199
||:||||.|||::|.||||.|.||.|||:.||.||:||| ::||..::.:
BPUM_2104 151 GPLLGLYLGSSKTTFPFLVAAFIYLLYGLTLAWQFQKHP-VAAPESTKQI 199
BSNT_03530___ 200 SVREAFMVTQKDYLFTIALVGITLCTFGYSQFSSTFPQYMAQNPLIGNGT 249
.|::|..:.|||.:|:|.|:|:|||:||||..|||.|||::.:|:|.:|.
BPUM_2104 200 GVKKALSIIQKDTVFSIILIGVTLCSFGYSHLSSTLPQYLSASPMIEDGP 249
BSNT_03530___ 250 KLYGLMLTLNAIVVLATQFPIVHFAKRFSPLCSLMLGNVMVSISMAIFTV 299
||:|.:|:|||:||:..|:|::..|||:|.:.||..|||:::.|:.....
BPUM_2104 250 KLFGYLLSLNAVVVIVVQYPLIMIAKRYSTILSLTTGNVLLAGSLFAIAF 299
BSNT_03530___ 300 SHGVPSIVMIVITFTIGEVLLFSMMDLYVDQIAKPGLKGTYFGAIGFSQL 349
|..:..:..|::.|||||||||:||||:||.:|||.:||:||||:|||||
BPUM_2104 300 SQSLGMLAFIIVVFTIGEVLLFAMMDLFVDNVAKPEVKGSYFGAMGFSQL 349
BSNT_03530___ 350 GNVIGPWIGGICIDLFSAGRPIYIFSVLSGITLLGLPFLAFAYRQMKMET 399
|:||||::||:|||.|.|..|..||||||.||:.|:|||...|.::|..:
BPUM_2104 350 GSVIGPFVGGLCIDYFGAAHPFSIFSVLSIITIAGVPFLLIGYYRLKKRS 399
BSNT_03530___ 400 TK---------HRSRLEKPL 410
.. |
BPUM_2104 400 AATVAVKVSGGH-------- 411
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