Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01258 and BPUM_2101

See DNA alignment / Visit BSNT_01258 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:50
# Commandline: needle
#    -asequence pep-align/BSNT_01258___yfmQ.1.24716.seq
#    -bsequence pep-align/BPUM_2101___yfmQ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01258___yfmQ-BPUM_2101___yfmQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01258___yfmQ-BPUM_2101___yfmQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01258___yfmQ
# 2: BPUM_2101___yfmQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 152
# Identity:      68/152 (44.7%)
# Similarity:   106/152 (69.7%)
# Gaps:           7/152 ( 4.6%)
# Score: 384.5
# 
#
#=======================================

BSNT_01258___      1 MTWAIVMLILMSLVKIVLTCLPTGVIEWLLGKFEVHAKLSGENASLSLDG     50
                     |.|.:..|::.||:|:::|.||:||:|.|..::.||||::.:..::..:.
BPUM_2101___y      1 MVWIVTSLVVFSLLKLLVTSLPSGVVERLFSRYAVHAKVTSDQTTIMFED     50

BSNT_01258___     51 KRLEGTEKQKVIDQFNEAVFLEKYYIYPGDEERYLHPENGGTPLVIDTKK    100
                     :.|:..:...:|..||:|:|:|:||||||||||:|||:.|..||.:.||.
BPUM_2101___y     51 RPLDDQQASDIIQHFNDAIFIERYYIYPGDEERFLHPQEGPAPLTMQTKL    100

BSNT_01258___    101 GKKDVKLFVYRYDDHIDVVKQY----KKKVIAYRVLSESLQKESLSVAGS    146
                     ||.||.|::|.||||:|||:|:    |||:.|||:.||.|| .|.::|.:
BPUM_2101___y    101 GKHDVTLYLYHYDDHVDVVRQFTHKPKKKLTAYRLRSEPLQ-TSYNLAHA    149

BSNT_01258___    147 LA    148
                       
BPUM_2101___y    149 --    149


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